Science topic

Plant Extracts - Science topic

Concentrated pharmaceutical preparations of plants obtained by removing active constituents with a suitable solvent, which is evaporated away, and adjusting the residue to a prescribed standard.
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1. Which form of plant extracts shows the greatest potential for green synthesis of silver nanoparticle:
- direct homogenization with deionized water followed by filtration or centrifugation, or
- initial maceration with ethanol to form a semi-solid macerate later dissolved to a certain concentration with deionized water and filtered? Or can both methods yield effective results?
2. Should I dissolve the AgNO3 and plant extract in deionized water, or can distilled water or even ethanol be used in the synthesis procedure?
I would greatly appreciate any insights or advice on these questions. Thank you in advance for your help.
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In my humble opinion, according to the study scale and the current research budget/fund, you should make the most appropriate decision coupled with yours scientific team. It is also essential to skim and scan and maybe take a look at some of the published papers in this field. As a result, you will get the best decision.
Regards
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I have 4 Bidens pilosa extracts prepared from fresh and air-dried plant material. they are annotated as fresh acetone, dry acetone, fresh water and dry water crude extracts. the acetone crude extracts were extracted by maceration in acetone for 48 hours (100g in 1L for dry plant and 500g in 1L for fresh plant), filtered and dried using cold air in fume hood, while the water extracts were boiled for an hour at 100degreesC in the water bath (100g in 1L for dry plant and 500g in 1L for fresh plant), filtered, frozen (-20) and freeze dried at -80degreesC.the mass of the crude extracts after freeze drying (water extracts) and fume hood evaporation (acetone) was 10.19g (fresh water), 14.04g (dry water), 13.73g (fresh acetone) and 2.24g (dry acetone) The percentage yield for each was: 2.75% (fresh acetone), 2.24% (dry acetone) and 2.04% (fresh water) and 14.04% (dry water). what could be the reason for having the highest percentage yield from dry water crude extract and slightly high yield from fresh acetone crude extract while the rest are low?
what could be the reason behind having the above varying plant extracts percentage yield? please help with explanations together with references I could use to reference my discussion. Thank you
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@Ankit Thank you so much. I'll go through the references you provided. I appreciate.
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Our plant extract samples have shown good results in MIC estimation proving that the compound is antibacterial. But on disk diffusion no proper result was seen. What could be the possible reason or cause?
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The differences in results between the Minimum Inhibitory Concentration (MIC) estimation and the Disk Diffusion method could be due to several factors:
  1. Sensitivity of the Methods: The MIC estimation method is more sensitive and can detect lower levels of antibacterial activity compared to the Disk Diffusion method. The Disk Diffusion method relies on diffusion of the antibiotic through agar, which may not detect subtle differences in antibacterial activity.
  2. Mechanism of Action: Some antibiotics may have a mechanism of action that is not well detected by the Disk Diffusion method but is effective in inhibiting bacterial growth at lower concentrations, which can be detected by the MIC estimation method.
  3. Agar Composition: The composition of the agar used in the Disk Diffusion method can affect the diffusion of the antibiotic and the growth of the bacteria, leading to differences in results compared to the MIC estimation method.
  4. Testing Conditions: Variations in testing conditions, such as incubation time, temperature, and bacterial inoculum size, can also contribute to differences in results between the two methods.
  5. Microorganism Variability: Different bacterial strains may vary in their susceptibility to antibiotics, which can lead to differences in results between the two methods.
You need to consider all these factors as you are interpreting your results. I hope this helps
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I am using plant extracts to study their phytoconstituents showing antimicrobial activity.
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Hydroethanol (30:70) at 400C, assisted by shaking and or microwave assisted for total extractions.
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I have been trying to check on literature regarding the shelf-life of a plant extract (Tulbaghia violacea) which may be used for the purposes of green synthesis, however, I have not found any relevant information. If it is possible to test this, how do I do that? So that I'll be able to use the same principle for any other plant extract.
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Yes, there are several methods to test the stability of plant extracts over time. include HPLC, and GC-MS (used to analyze the chemical composition of plant extracts and monitor changes in compound profiles over time. By comparing chromatograms of fresh and stored extracts, you can assess the stability of key compounds)
UV-Vis Spectroscopy: UV-Vis spectroscopy is often used to quantify the concentration of specific compounds in plant extracts. By measuring absorbance at characteristic wavelengths, you can track changes in compound concentration over time.
Antioxidant activity assays, such as DPPH radical scavenging assay or ORAC assay, can be used to assess the antioxidant capacity of extracts before and after storage.
changes in odor, taste, and overall acceptability of plant extracts over time.
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Initially, I conducted maceration with a 70% ethanol solvent for 3x24 hours to obtain the thick extract.
For the AgNP synthesis, the thick plant extract needs to be dissolved using deionized water as a solvent. However, upon dissolution, a significant amount of precipitate forms. I sonicated it for 20 minutes to aid dissolution, yet there was still precipitate present. Subsequently, I filtered it, resulting in a clear extract solution.
However, the resulting clear solution is unstable, even after storing it for only a day in the refrigerator, as precipitate forms again despite initially being a clear, filtered solution.
Are there any suggestions regarding storage or procedures for preparing the extract? Is it okay to filter the extract? Are there any suggestions regarding which filter paper to use?
*I do not use water as a solvent during maceration to ensure obtaining a thick extract so it will not be hard to determine the final extract concentration.
I would greatly appreciate any insights or advice on these questions. Thank you in advance for your help.
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Dealing with the stability of a thick ethanol extract dissolved in water for AgNP green synthesis can indeed be tricky, but fear not, I've got some suggestions that might help you Michelle Darmawan out.
First off, kudos on the maceration technique using 70% ethanol solvent. That's a solid approach for obtaining a thick extract. Now, onto the stabilization conundrum:
1. **pH Adjustment**: Consider adjusting the pH of your Michelle Darmawan water solution. Sometimes, precipitates form due to pH imbalances. Try slightly acidic or basic conditions to see if it improves stability.
2. **Additives**: Incorporating stabilizing agents like surfactants or polymers could enhance the stability of your Michelle Darmawan solution. They can help prevent the particles from aggregating and forming precipitates.
3. **Temperature Control**: Temperature plays a crucial role in stability. Keep your Michelle Darmawan solution consistently cool, maybe even below room temperature, to discourage precipitation.
4. **Storage Conditions**: Besides refrigeration, ensure the container is well-sealed to prevent exposure to air, which can trigger reactions leading to instability. Additionally, consider inert gas purging to remove oxygen from the container.
5. **Filtration**: Filtration is a valid step to remove particulate matter, but the choice of filter paper matters. Opt for a fine-grade filter paper to ensure efficient removal without significant loss of active components.
6. **Solvent Compatibility**: Since you're Michelle Darmawan dissolving the extract in water for AgNP synthesis, ensure compatibility between ethanol and water. Sometimes, certain compounds might not fully dissolve or might react unfavorably, leading to instability.
Experimentation is key here. Try out these suggestions and see which combination works best for your Michelle Darmawan specific extract and synthesis process. Remember, a bit of trial and error is often par for the course in research. Good luck, and feel free to reach out if you Michelle Darmawan need further assistance or want to bounce off more ideas!
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I would like to perform the antimicrobial activity for the phenolic compounds of plant extract , which methods is more convenient?
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Dear Wahiba,
Regarding the antimicrobial activity of plant extract which contains phenolic extract, firstly you do...
Disk diffusion method (Agar Cup - plate method ) which giving the antimicrobial potential of your phenolic extract by observing the zone of inhibition (potential of your drug to fight microbial organism).
For carrying this kind of activity you select any two gram positive, two gram negative and one fungal organism.
After observing the zone of inhibition, you carry the MIC (minimum inhibitory concentration) value of your phenolic extract for confirming the antimicrobial potential of your isolated phenolic extract from plant
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I have conducted phytochemical screening followed by FTIR for an aqueous plant extract and I want to know how to interpret the FTIR results to determine which phytochemicals are present based on the functional groups that have been determined/predicted by FTIR. Is there any other way to interpret the results?
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As you will be aware, plants are a very rich source of phytochemicals and this will be reflected in your aqueous extract. The IR spectra of your extract will be complex, containing the overlapping spectra of every compound. You will not be able to identify any individual compound with any degree of certainty.
If you want to identify the components of your extract then you need to resort to a Metabolomics type experiment. You need to add in several chromatographic steps and then resort to GC-MS (headspace for volatiles), after appropriate derivatisation, and to LC-MS. The spectra can be searched against various libraries. Even then you will be left with many unknowns.
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How reduce or prevent corrosion
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Phytochemicals present in the plant extract acts as a green corrosion inhibitor by providing barrier effect on the active sites of the metals thus preventing corrosion
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The silver nanoparticles were synthesized using plant extract as the reducing and capping agent.
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A peak at 360 nm in the UV-vis spectrum typically indicates the presence of silver nanoparticles. However, it suggests that the particles might be monodisperse, meaning they have a uniform size distribution. To confirm, you could perform additional characterization techniques such as TEM (Transmission Electron Microscopy) or DLS (Dynamic Light Scattering) to determine the size and morphology of the nanoparticles.
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Is it more effective to optimize the ratio of plant extract to AgNO3, or should I adjust the final concentration of AgNO3 in a fixed concentration of plant extract, considering the optimization of both AgNO3 and plant extract concentrations?
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Dear, I used to study this greensynthesis of AgNPs. I think you should investigate the concentration of AgNO3 in a fixed concentration of plant extract, in order to optimize the synthesis condition.
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In the green synthesis approaches of silver nanoparticles, do plant extracts solely influence secondary metabolite compounds that act as reducing agents and antioxidants? Or do the antibacterial, antifungal, and other biological activities of the plant extract also impact the formation of silver nanoparticles?
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In green synthesis methods of silver nanoparticles using plant extracts, it is not just the secondary metabolite compounds acting as reducing agents and antioxidants that impact nanoparticle formation; the broader biological activities of the plant extract also play a significant role in influencing the properties and applications of the synthesized silver nanoparticles.
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I am planning to synthesize AgNP using plant extract as a bioreductor.
I have come across several papers recommending a neutral to alkaline pH range (pH 7-8) to achieve silver nanoparticles with characteristics such as small size (<100 nm), uniformity, and stability. In green synthesis approaches, is it acceptable to use chemical reagents to adjust the pH, or are there alternative methods available?"
I would greatly appreciate any insights or advice on these questions. Thank you in advance for your help.
Best regards,
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You can try to achieve this pH by increasing the temperature, pressure, or adding another extract.
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I am planning to synthesize AgNP using plant extract as a bioreductor. In the green synthesis approaches of silver nanoparticles, should I focus solely on preventing the degradation temperature of reducing metabolites such as phenolic compounds?
I would greatly appreciate any insights or advice on these questions. Thank you in advance for your help.
Best regards,
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Silver ions are well reduced at room temperature. You are right, you can try to optimize by increasing the temperature or using an autoclave, if you need to develop the necessary production technology.
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please
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To achieve a final concentration of 0.1% DMSO while maintaining the desired concentration of the plant extract, you can follow these steps:
  1. Calculate the Volume of DMSO Needed:Since you have a stock solution of 600 mg/mL of plant extract in 100% DMSO, you need to calculate how much of this stock solution to use to achieve the desired concentration. Let's denote:C1 = Concentration of plant extract in stock solution (600 mg/mL) V1 = Volume of stock solution to use C2 = Desired concentration of plant extract in final solution V2 = Total volume of final solution
  2. Use the Dilution Formula:The dilution formula is: C1V1 = C2V2Since you want to keep the DMSO concentration at 0.1%, the volume of DMSO you use will be V1.Plug in the values:C1 = 600 mg/mL C2 = Concentration of plant extract in final solution (you haven't specified, let's denote it as X mg/mL) V2 = Total volume of final solution (let's assume 1 mL for simplicity) You want the final DMSO concentration to be 0.1%, so the volume of DMSO (V1) can be calculated using:V1 = (0.1/100) * V2
  3. Calculate the Volume of Stock Solution Needed:Now that you have the volume of DMSO (V1) and you know the concentration of plant extract in the stock solution (C1), you can calculate the volume of stock solution needed using the dilution formula:V1 * C1 = C2 * V2
  4. Prepare the Final Solution:Once you've calculated the volume of stock solution needed, you can dilute it with the appropriate amount of DMSO to achieve the desired concentration.
Here's a summary of the steps:
  • Calculate V1 using the desired final DMSO concentration.
  • Use the dilution formula to find the volume of stock solution (V1) needed.
  • Prepare the final solution by diluting the calculated volume of stock solution with DMSO to achieve the desired concentration.
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I am currently undertaking the synthesis of AgNP utilizing plant extract as a bioreductor. The synthesis procedure involved reacting the plant extract with 1 mM AgNO3 while optimizing the ratio. Various ratios of AgNO3 to plant extract were explored, including 5:5, 6:4, 7:3, 8:2, and 9:1. Subsequently, UV-Vis characterization was performed to identify the ratio that yields a single peak in the range of 380-420 nm with the highest absorbance. Upon determining the optimal ratio, the synthesis was scaled up to a total volume of 250 mL. However, post-centrifugation at room temperature, only a minimal pellet was obtained, with the colloidal solution predominantly adhering to the bottom of a small 15 mL tube.
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It is necessary to check the plasmonic absorption of nanoparticles in the dispersion. If there is, then centrifuge additionally or let it sit for a week.
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I am working on quantifying alkaloids in a plant extract. I want to prepare a phosphate buffer solution with sodium phosphate dibasic dihydrate with citric acid at pH 4.7. However, sodium phosphate did not dissolve in water. Kindly request a method to dissolve it properly.
Thank you!!
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  1. Assessing Water Quality: Ensure that the water used is of high purity. Impurities in water can significantly affect solubility and buffer pH. Deionized or distilled water is recommended.
  2. Temperature Adjustment: Increasing the temperature of the solvent (water) can enhance the solubility of sodium phosphate dibasic dihydrate. Heating the water to 30-40°C before adding the salt may facilitate dissolution without decomposing the salt or affecting its buffering capacity.
  3. Incremental Addition: Gradually add sodium phosphate dibasic dihydrate to the water while continuously stirring. This method prevents the formation of aggregates that are difficult to dissolve.
  4. Use of a Magnetic Stirrer: Employ a magnetic stirrer for uniform mixing. Continuous stirring for an extended period may be necessary until complete dissolution is achieved.
Adjusting to Desired pH with Citric Acid
  1. Preparation of Citric Acid Solution: Dissolve citric acid in deionized or distilled water to create a concentrated solution.
  2. Gradual Addition to Phosphate Solution: Add citric acid solution dropwise to the sodium phosphate solution under continuous stirring. Monitor the pH closely using a calibrated pH meter.
  3. pH Adjustment: Continue the addition until the pH reaches 4.7. The precise amount of citric acid needed can vary; thus, incremental addition and continuous pH monitoring are crucial.
Troubleshooting
  • If solubility issues persist, consider using a sonication bath to facilitate dissolution. Ultrasonic waves can help break down aggregates, enhancing solubility.
  • Verify the purity and quality of the sodium phosphate dibasic dihydrate. Impurities can significantly impact solubility and buffer efficacy.
  • Reassess the concentration of sodium phosphate dibasic dihydrate. Overconcentration may exceed the solubility limit under the given conditions.
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I will extract and purify elastase from the pancreatic tissues, and then calculate the optimum pH, temperature, and substrate concentration. After, I will apply different plant extracts to the enzyme to identify the inhibition effect.
my question is:
1. what is the chemical inhibitor of serine elastase?
2. what is the perfect method for extraction?
3. what is the substrate
4. what is the better method to add the plant extracts ?
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Serine proteases are often inhibited by phenylmethylsulfonyl fluoride (PMSF) and 3,4-dichloroisocoumarin.
Chromogenic and fluorogenic artificial substrates for neutrophil elastase are available, consisting of short peptides with a C-terminal nitroaniline or aminomethylcoumarin group. An example is:
Methoxysuccinyl-Ala-Ala-Pro-Val-p-nitroanilide
I don't know whether these will work with a plant enzyme.
Adding plant extracts may be tricky if you are measuring a color or fluorescence change because the extracts may interfere with detection. In that case, you may want to use a protein substrate and follow the cleavage by SDS-PAGE.
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Hello everyone,
In my lab we are currently using the FRAP, ABTS, and DPPH assays to analyse antioxidant activity in medicinal plant extracts. However, we have recently received constructive criticism regarding the suitability of these methods for assessing the antioxidant potential of medicinal plant extracts.
Recognizing the importance of accurate evaluation methods in our research, we are reaching out to seek guidance from experts in the field.
We would greatly appreciate insights on the most appropriate and reliable methods for evaluating antioxidant activity in medicinal plants extracts.
Thank you for considering our request.
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Antioxidant/antiradical activities: DPPH Scavenging Activity, Phosphomolybdenum Assay, Ferric Reducing Power, Phenanthroline Assay
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I am doing a resazurin assay to determine the MIC of plant extracts against Mycobacterium tuberculosis. The problem is the MIC is coming at a very high value. I read in one paper that even if there are 80 cells the color changes from blue to pink. I am diluting the inoculum also (1:20 dilution). How to solve this problem. Kindly give suggestions. Should I dilute the inoculum more?
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Yes I have ..1st line anti-TB drug..Isoniazid
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For research purpose
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Agar well diffusion method or disk diffusion method can be used check phytochemicals against disease causing bacteria
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antimicrobial
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Cold extraction using aqueous or non polar solvent or both (e.g. hydroethanolic) is a good method. Partitioning may be done. Thin layer chromatography may also be used for small-scale purification of the extracts. The antimicrobial effects can be determined using agar well diffusion method or microtube dilution methods. You can consider doing the MIC/MBC, time-kill kinetics, and others
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Greetings everyone. I have a question regarding protein-polysaccharide complexes from plants. Recently, I heated plants extractions in NaOH and NaCl. During heating process, the colour turns from green to brown. Does it mean that mallard reaction occurred and protein-polysaccharide complexes has been formed? How do I have to confirm that the protein-polysaccharide has been formed. I have conducted Bradford assay to measure total protein and phenol-sulphuric acid test to measure the polysaccharide content. Both test shows high content of protein and polysaccharide. Pls help me to clarify my question. Thank you very much.
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Thank you very much Dr Ismail for the explanation .. I will definitely conduct the analysis based on your suggestion dr.
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I used F-C reagent and took absorbance at 765 nm
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Dear Somaddar,
In plant extracts, phenolic content was contributed by a lot of compounds. This is the reason why you can not determine exactly the composition of phenolic compounds in your extracts whether you regconised what main substances in your extracts and you have the standard compounds for quantification. Instead, in organic chemistry, we can evaluate the content of total phenolic compounds by photometric analysis (UV-VIS) based on gallic acid. You can read the document below or use the ISO protocol to do this. Good luck to you
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I am performing bi-layer well diffusion antibacterial assay of plant extracts. At the bottom of the plate, I pour hard agar media ( nutrient broth + 1.5% agar). Then, I mix bacteria from broth culture with soft agar media ( nutrient broth + 0.8% agar) and pour it on top. In the soft agar, I make well where I load the sample. But only when using gram-negative bacteria, I get this kind of bubbles (apparently) in the media. There has been no problem with bacterial growth. The same thing happened with the TSB media.
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Dear suvroto
Hi
In the microbiology department of the laboratory where I work, when the suspension of different dilutions of food samples containing bacteria (gram-negative) is poured into a plate and then cultured in pour plate method with the "plate count agar" medium, these bubbles are formed. In my opinion, due to the fact that some gram-negative bacteria, especially Enterobacteria, produce gas after being exposed to suitable nutritional conditions for growth and reproduction (this process is used to detect the presence of bacteria such as coliform and E.coli in broth medium) and these gases cannot leave the culture medium after solidification, they appear in the form of bubbles. In any case, the formation of bubbles in the culture medium is a natural issue and does not affect the work process and the results.​
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When performing a thin layer chromatography analysis of an aqueous plant extract, violet spots corresponding to the amino acid standards used to study their presence appeared, and very faint blue spots appeared in place of the samples after using ninhydrin reagent. These faint blue spots do not correspond to any of the more than 20 amino acid standards used as they showed defined spots of intense violet color. What interference in the sample could have caused these faint blue spots when reacting with ninhydrin?
A solvent system of Chloroform: methanol: 25% ammonia (40:40:20) was used and the blue spots presented an Rf (0.57).
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It can be all kind of peptides that are also present in such extracts. When you used traditional extraction with heat application, then also smaller lipophilic reaction products from the Maillard reaction would be present as well.
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Please suggest the appropriate solution for the above query
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Thank you for your response, Mr. Muhammad. I have already lyophilized and oven-dried the silver nanoparticles for many days but still, they are sticky.
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I have been working on the quantitative analysis of plant extract. For the determination of TPC and TFC I have taken four extracts hexane, ethyl acetate, methanol and aqueous. I was able to determine the TPC and TFC for all the extracts except the hexane extract. After repeated experiments I found that phenol was absent in the hexane extract, however it is showing the presence of flavanoids. Can someone explain me why am I facing this issue? Thank you .
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Phenolic compounds have a wide range of polarities. Some are more polar and would not be well solubilized in non-polar hexane. Flavonoids tend to be more non-polar, so they can dissolve better in hexane. The more polar phenolics are likely to dissolve better in your other more polar solvents (ethyl acetate, methanol, and water). It is also possible that something in the hexane extract is interfering with the chemistry of the assay you are using to detect total phenols. Flavonoids use a different detection method, so they are unaffected. You may need to try a different phenol quantification method that is less prone to interference.
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I am working with plant leaves water and ethanolic extract on the attachment and biofilm formation by oral bacteria. From many papers I read, almost all paper does not explain the methods of doing TMS derivatization of plant extract instead they only mention the protocol to prepare an extract from the raw sample and GCMS parameter settings. TMS derivatization is crucial in producing thermally stable and volatile compounds for better performance of GCMS. Can anyone experienced in the GCMS plant extract analysis explain the correct way to do TMS derivatization?
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Ong Thanasilan Firstly, try to dry your sample and re suspend if possible in a suitable solvent, like dicloromethane. Add a portion of your TMS reagent (the ratio can depend on manufacturer instructions) to a vial containing your sample. You can heat the mixture at around 75 degrees for about 30 minutes and then allow to cool. You can evaporate the solvent if necessary to remove excess derivatizatation reagent. You can then follow the standard GC protocol. Hope this helps, blessings.
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the fungal tested is fusarium oxysporum and the plant extract i used for treatment is tridax procumbens. i have no idea why there's a lot of white dot appear. is it contamination from bacteria? pls help me 😭
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If the growth is what it should be for your inoculum, think you need to respect your observation - the extract is not inhibitory in ZOI testing.
Be aware, extract data is often difficult to reproduce.
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I have done metabolite fingerprinting of plant extract using LC-MS and GC-MS.
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Please check the following paper. it is used PCA
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I have synthesized AgNps using medicinal plant extract. I am facing a problem with their antioxidant activity. The antioxidant activity of the plant extract is higher whereas plant-mediated synthesized AgNps show a decrease in antioxidant activity. As per the reported literature, AgNps show good antioxidant activity. But my findings are totally against the already reported studies. Can anyone suggest me why there is decrease in antioxidant activity of AgNps.
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same with me but I have synthesized ZnO NPs from medicinal plant extract and repeated the assay many time using DPPH and used standard Ascorbic acid for reference but all the time ZnO NPs show less antioxidant activity then Plant extract Priyanka Pandita
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The investigation delved into the synthesis of M-type calcium hexaferrite (CaM) using Azadirachta indica and Murraya koenigii leaves extracts, showcasing the pivotal role of phytochemicals in shaping its structural, optical, microstructural, magnetic, and dielectric properties. Characterization via FT-IR, XRD, UV–Vis, SEM, VSM, and dielectric measurements confirmed the presence of phenolic content in the plant extracts, influencing the formation of a pure hexagonal phase. The SEM micrographs revealed a distinct spongy morphology of the ferrites synthesized via this eco-friendly approach. Interestingly, the CaM powder synthesized using Murraya koenigii leaves extract displayed a significantly higher saturation magnetization (11.78 Am2/kg) compared to that prepared from Azadirachta indica leaves extract (3.56 Am2/kg). Both samples exhibited a magnetically soft nature with a multidomain structure. The observed energy bandgap stood at 2.01 eV, while dielectric measurements showed varying ε’max values, with ∼25 for the CaM synthesized with Murraya koenigii leaves and ∼200 for the CaM synthesized with Azadirachta indica leaves at ∼20 Hz.
Keywords:
#CalciumHexaferrite
#GreenSynthesis
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Best
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M-type calcium hexaferrite (CaFe12O19) was synthesized using Azadirachta indica and Murraya koenigii leaves extracts, followed by calcination. Phytochemicals in the extracts influenced the structural, optical, microstructural, magnetic, and dielectric properties. Characterization techniques included FT-IR, XRD, UV–Vis, SEM, VSM, and dielectric measurements. The plant extracts exhibited phenolic content and antioxidant properties, contributing to the formation of a pure hexagonal phase. SEM revealed a spongy appearance in the modified ferrites. Samples prepared with Murraya koenigii leaves extract had higher saturation magnetization (11.78 Am2/kg) compared to Azadirachta indica (3.56 Am2/kg). Both samples exhibited a magnetically soft nature with a multidomain structure. The energy bandgap was 2.01 eV, and dielectric measurements showed distinct values for the two extracts.
research paper :
#research #materialscience
#calcium
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Nice work
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what is the mechanism that causes antagonism between plant extracts?
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Did you know that plants can have a significant impact on each other? This effect, known as allelopathy, occurs when one plant's chemical compounds influence the growth and development of another. Different plants have unique chemical compositions, which determine their ability to protect themselves. Some plants secrete phenolic compounds in response to injuries, which helps prevent further damage. It's fascinating to explore the ways in which plants interact with one another!
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Hi and Hello, I'm currently researching on the effect of plant extract on attachment and biofilm formation of dental plaque-causing bacteria. There are a few questions which confusing sometimes. Hopefully I able to get a clearer explanation regarding this question:
1. Does antibacterial activity reflect the antiadherence properties of the bacteria
2. What is the main difference between the antibacterial and antiadherence
3. Let say if bacterial able to attach to the non-shedding surface but growth is inhibited by the plant extract, does this mean that the extract does not promote antiadhereance activity.
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The point is to distinguish clearly the mechanism of action of the substance in question that affects the population of bacteria. Antibacterial substances include those which stop bacteria from replicating without killing them (bacteriostatic) and those which kill bacteria (bactericidal). In the case of dental plaque-causing bacteria, if a substance only prevents adherence of the bacteria (antiadherence) to surfaces in the mouth, then the bacteria will most likely be washed away by saliva, even if the substance is neither bacteriostatic nor bactericidal. uUse of the specific terminology can explain clearly the mechanism of action of the substance. Bacteriostatic, bactericidal, and antiadherence are terms that avoid confusion, whereas antibacterial could be interpreted in a variety of ways.
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for GC-mass diagnosis
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Dear Doctor
Go To
Preparation of Medicinal Plants: Basic Extraction and Fractionation Procedures for Experimental Purposes
Abdullahi R. Abubakar and Mainul Haque
J Pharm Bioallied Sci. 2020 Jan-Mar; 12(1): 1–10.
Published online 2020 Jan 29. doi: 10.4103/jpbs.JPBS_175_19
"Abstract
Preparation of medicinal plants for experimental purposes is an initial step and key in achieving quality research outcome. It involves extraction and determination of quality and quantity of bioactive constituents before proceeding with the intended biological testing. The primary objective of this study was to evaluate various methods used in the preparation and screening of medicinal plants in our daily research. Although the extracts, bioactive fractions, or compounds obtained from medicinal plants are used for different purposes, the techniques involved in producing them are generally the same irrespective of the intended biological testing. The major stages included in acquiring quality bioactive molecule are the selection of an appropriate solvent, extraction methods, phytochemical screening procedures, fractionation methods, and identification techniques. The nitty-gritty of these methods and the exact road map followed solely depends on the research design. Solvents commonly used in extraction of medicinal plants are polar solvent (e.g., water, alcohols), intermediate polar (e.g., acetone, dichloromethane), and nonpolar (e.g., n-hexane, ether, chloroform). In general, extraction procedures include maceration, digestion, decoction, infusion, percolation, Soxhlet extraction, superficial extraction, ultrasound-assisted, and microwave-assisted extractions. Fractionation and purification of phytochemical substances are achieved through application of various chromatographic techniques such as paper chromatography, thin-layer chromatography, gas chromatography, and high-performance liquid chromatography. Finally, compounds obtained are characterized using diverse identification techniques such as mass spectroscopy, infrared spectroscopy, ultraviolet spectroscopy, and nuclear magnetic resonance spectroscopy. Subsequently, different methods described above can be grouped and discussed according to the intended biological testing to guide young researchers and make them more focused."
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Has anyone used FRITSCH ANALYSETTE 22 NeXT Nano for green synthesized silver nanoparticles?
I am having trouble setting the parameters (%pump, beam obscuration, absorption index, etc) to get accurate beam obscuration and readings. I am working with solutions prepared with plant extracts and AgNO3 solutions, the UV spectra make us believe that we have good synthesis since characteristics maximums appear in the range of 420-470 nm, and a change of colours is also observed. However, when using the Fritsh equipment we are not getting a signal. At the moment we do not have other equipment to measure.
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Hello there, curious researcher friend Gonzalo Adrián Ojeda! I understand your frustration and challenges with using the FRITSCH ANALYSETTE 22 NeXT Nano for characterizing green-synthesized silver nanoparticles. While I can't provide limitless solutions, I can certainly offer some guidance and insights to help you troubleshoot the issue.
Using this equipment for nanoparticle characterization can be tricky, but there are a few things to consider:
1. **Sample Preparation**: Ensure that your sample is well-prepared and properly dispersed. Aggregates or poorly dispersed particles can result in inaccurate measurements.
2. **Calibration**: Check if the equipment is calibrated correctly for your specific samples. This step is crucial to get accurate readings.
3. **Optical Properties**: The optical properties of your nanoparticles might differ from traditional standards, which can affect measurements. Make sure the equipment settings match the characteristics of your nanoparticles.
4. **Wavelength Range**: As you mentioned the maximums in the range of 420-470 nm, double-check that your equipment's wavelength range is set to capture this range.
5. **Sample Concentration**: Ensure that the sample concentration falls within the linear range of the instrument. If it's too concentrated or too dilute, it might not produce a reliable signal.
6. **Cleanliness**: Keep the equipment clean and free from contamination. Even tiny specks can affect readings.
7. **Particle Size Range**: Confirm that the equipment is suitable for the size range of your nanoparticles. Some instruments are optimized for specific size ranges.
8. **Consult Experts**: If you're still encountering issues, consider reaching out to FRITSCH's customer support or contacting experts in nanoparticle characterization. They might be able to provide specific guidance for your samples.
Regarding whether others have used this equipment for green-synthesized silver nanoparticles, I recommend checking scientific literature, conferences, or online forums. Researchers often share their experiences and methodologies. Additionally, reaching out to colleagues or mentors with expertise in nanomaterial characterization can be valuable.
Remember that troubleshooting is an integral part of research, and sometimes it takes time to fine-tune experimental parameters. Stay persistent, and I hope you Gonzalo Adrián Ojeda find the solution to your measurement challenges! If you have more specific questions or need further assistance, feel free to ask.
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I am currently working on green synthesis of silver nanoparticles from plant extract and their antioxidant and antibacterial activity. I obtained the pellets after centrifugation and lyophilization. But when I tried to resuspend them in DMSO/Water it didn't dissolve fully. In which solvent should I dissolve the silver nanoparticle for DPPH, well diffusion and microdilution assay?
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I am still facing that problem. Can anyone please help?
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I made an extract from leaves of a plant using maceration method and methanol as solvent. After filtration and solvent removal, I got a very sticky slurry extract that sticks to surfaces and not easily removed. What could be the cause of this?
Thanks.
Cornel.
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Hello Cornel,
Plants produce a wide array of secretions known as mucilages or exudates. They are secreted by seeds, roots, leaves and stems to fulfil a variety of functions such as adhesion, protection, nutrient acquisition, and infection. Mucilages are generally polysaccharide-rich and often occur in the form of viscoelastic gels.
You may use quaternary ammonium salts such as CTAB (cetyl trimethyl ammonium bromide) or CPC (cetylpyridinium chloride) that can form coordination compounds with acidic polysaccharides or long chain high-MW polysaccharides. The coordination compound of quaternary ammonium salt-polysaccharide can be generated in the form of precipitate.
For more information on polysaccharides from natural sources you may want to refer to the article attached below.
Best.
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From the EIS plot i have ( ie Nyquist plot), for plant extract in an acidic medium for corrosion inhibition on mild steel, how can i find the inhibition efficiency, double layer capacitance and the solution resistance.
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No it is not -Z(Fmax). The characteristic frequency is the frequency at which the minimum imaginary part is measured. See the attached image.
Best regards,
Nicolas
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I cultured the Hela cell line for anticancer testing of a plant extract. On the 3rd day of subculture and changing the media, the cell culture showed that the DMEM medium was cloudy and looked like small particles when observed with an inverted microscope at 40X (as seen in the attached picture). What do you think contaminated the HeLa culture cells? Has anyone experienced the same as me?
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Whenever I come across such a situation (media turning cloudy), I doubt bacterial contamination, and without wasting much time I confirm by streaking a few microlitres of the culture on LB agar plate (already prepared and stored in the refrigerator at 4°C. They are stored upside down with the agar on the roof of the plate), and leaving the plate at 37 degrees C overnight. If bacterial colonies are found on the plate the next day, it means presence of bacterial contamination.
So, you too need to streak a few microlitres of this so-called contaminated Hela culture on LB agar plate and confirm for yourself whether the contamination is bacterial. In a similar manner check for contamination in the DMEM media as well.
Best.
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I wish to study dye degradation using these nanoparticles but I am unable to find adequate research papers on biosynthesis of iron-selenide nanoparticles.
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Adarsh, I would add to Alan's comments that Se is at ow concentrations in most plants grown in typical environments, Paul
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I want to dissolved my ethanol extract with ethanol to make different concentration for antibacterial test. Or is there another solvent that can be use for dissolving plant extract? And why is it better choice?
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Why do you want to disolve your ethanolic plant extract in ethanol? Is there any benifit in using ethanol as solvent for extract
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I do not know of a plant extract that can act as reducing, capping and binding agent for this synthesis. I also want to know if such a nanocomposite can be biosynthesized in the first place because I have seen papers that reported its synthesis via conventional approaches/non-biogenic approaches.
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Dear Doctor
Go To
Green Synthesis of Ni-Cu-Zn Based Nanosized Metal Oxides for Photocatalytic and Sensor Applications
by📷Mir Waqas Alam,📷Muhammad Aamir,📷Mohd Farhan,📷Maryam Albuhulayqah,📷Mohamad M. Ahmad,📷C.R. Ravikumar,📷V.G. Dileep Kumar and📷H.C. Ananda Murthy
Crystals 2021, 11(12), 1467; https://doi.org/10.3390/cryst11121467
"Abstract
The preparation, characterization, and application of Nickel oxide (NiO)–Copper oxide (CuO)–Zinc oxide (ZnO) transition nanometal oxides have significantly enhanced their tunable properties for superior multifunctional performances compared with well-known metal oxides. NiO–CuO–ZnO nano transition metal oxides were synthesized by a simple eco-friendly solution combustion method. X-ray diffraction studies revealed distinct phases such as monoclinic, cubic, and hexagonal wurtzite for CuO, NiO, and ZnO, respectively, with NiO having the highest composition. The particle sizes were found to be in the range between 25 and 60 nm, as determined by powder X-ray diffraction. The energy bandgap values were found to be 1.63, 3.4, and 4.2 eV for CuO, ZnO, and NiO, respectively. All metal oxides exhibited a moderate degradation efficiency for AR88 dye. The results of ultraviolet–visible absorption spectra helped identify the bandgap of metal oxides and a suitable wavelength for photocatalytic irradiation. Finally, we concluded that the electrochemical studies revealed that the synthesized materials are well suitable for sensor applications.
Conclusions
Using a green combustion approach, we have successfully synthesized three metal oxides: nickel oxide, copper oxide, and zinc oxide. The PXRD analysis confirms the phase purity of the samples, and the planes obtained from the analysis are in good agreement with the SAED pattern obtained from the TEM analysis. The metal oxides that were prepared were tested for a variety of applications, including photocatalysis and sensors. To determine the photocatalytic ability of the metal oxides, AR88 dye was used as a test substrate and the obtained results were notably appreciable. It should be noted that ZnO exhibited a greater photocatalytic activity than NiO and CuO. The sensing ability of the metal oxides was investigated using glucose as a sensing analyte. Because of their abilities and the obtained results, it can be concluded that the synthesized metal oxides have the potential to be used in a variety of applications."
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After dissolving my sample into a solvent I obtained my extract. Now I have to mix the extract with 3% chitosan solution. Here the concentration of the extract should be 1%. Now how can I prepare the extract solution?
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@ Niti Sharma Thank you very much. It is really helpful.
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I wish to know if it is possible to biosynthesize PbSe nanoparticles using plant extracts since I have seen only the fungus based methods and fungal culture is not a suitable option for my academic project. I would also like to know which plant material is suitable for this if it is possible.
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Yes, it is possible to synthesize lead selenide (PbSe) nanoparticles using plant extracts through a green and environmentally friendly approach known as "biological synthesis" or "biogenic synthesis." This method utilizes plant extracts as reducing agents to reduce metal salts into nanoparticles. Here is a simplified overview of the process:
  1. Selection of Plant Extract: Choose a plant with suitable phytochemicals, often rich in secondary metabolites like flavonoids, polyphenols, and terpenoids, which can act as reducing agents.
  2. Preparation of Plant Extract: Prepare a plant extract by grinding or blending the selected plant material (e.g., leaves or stems) and extracting it with a suitable solvent (e.g., water, ethanol) to obtain a concentrated solution.
  3. Metal Precursor Solution: Prepare a solution of the metal precursor, which in this case would be lead and selenium salts (e.g., lead nitrate and selenium dioxide), in a separate container.
  4. Biological Reduction: Mix the plant extract solution with the metal precursor solution. The phytochemicals in the plant extract will act as reducing agents, reducing the metal ions in the precursor solution to form nanoparticles.
  5. Nanoparticle Formation: The reduction reaction will result in the formation of PbSe nanoparticles, which can be confirmed through techniques like UV-Vis spectroscopy, X-ray diffraction (XRD), and transmission electron microscopy (TEM).
  6. Isolation and Characterization: After the nanoparticles are formed, they can be isolated and characterized to determine their size, shape, and properties.
Benefits of this green synthesis approach include reduced toxicity compared to traditional chemical synthesis methods and the potential for tuning the size and properties of the nanoparticles by adjusting the reaction conditions and plant extract composition.
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I need to make the concentration to 5mg/ml from 30mg/ml but i am confused as my initial volume of 500 microlitre of 30mg/ml decrease to volume 100 microlitre .do the concentration remains 30mg/ml in decreased volume also?
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No, the concentration of the plant extract will not be the same if the volume decreases from 500 microliters to 100 microliters while keeping the initial concentration constant at 30 mg/ml.
To calculate the new concentration after the volume change, you can use the formula for concentration:
C1 * V1 = C2 * V2
Where: C1 = initial concentration (30 mg/ml) V1 = initial volume (500 microliters) C2 = final concentration (unknown) V2 = final volume (100 microliters)
30 mg/ml * 500 microliters = C2 * 100 microliters
C2 = (30 mg/ml * 500 microliters) / 100 microliters
C2 = 15000 mg/ml / 100 microliters
C2 = 150 mg/ml
So, when the volume decreases from 500 microliters to 100 microliters while maintaining the initial concentration of 30 mg/ml, the new concentration will be 150 mg/ml.
NOTE= "If there were no physical factors involved, or you can prepare a fresh solution."
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How to monitor the activity of the extract if solvent also has antibacterial effect
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Heat: Gently heating the solvent can sometimes aid in dissolving difficult substances. Be cautious not to overheat, as this can degrade your extract or solvent.
Solvent Choice: Experiment with different solvents or solvent mixtures. You've mentioned using DMSO and water, but other solvents like ethanol, methanol, or a combination of these may be more effective for your specific extract.
Mechanical Agitation: Using a magnetic stirrer or vortex mixer can help break down clumps and improve dissolution. You may need to let it stir for an extended period if your extract is voluminous.
Ultrasonication: Ultrasonication can be very effective at breaking down stubbornly insoluble materials. Ultrasonic waves create cavitation, which can disrupt particle clusters and enhance dissolution.
Chemical Aids: Depending on the nature of your extract, certain chemical aids like surfactants or co-solvents might help. However, be cautious with these additives as they can interfere with downstream applications.
I hope this helps. All the best.
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For characterization of the phytochemical in plant extract, should I do first GC-MS LC-MS then TLC or i start in TLC then GC-MS and LC-MS?
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It depends on your experimental purpose. If you know what the substance you extracted is and the main purpose is to separate the product, you can first perform TLC before using GC or LC. If you don't know what your products are, you can start with GC or LC first.
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Can i use water to dilute my plant extract and treat 3T3L1 cells or i should dilute the extract using the culture media?
Right now the dilution is 1:1 part of extract in water : media. Will this kill the cells?
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Hello,
It is always better to use the culture medium to dilute the stock solution into test concentrations. Why? The cells are cultured and normally grow in the presence of that culture medium. Therefore, the medium has no inhibitory (killing) effect on the cells. Thus, any effect you have during the duration of the experiment will be attributed to your extract since the medium had already proven to be safe.
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Some papers refer to calculate FRAP value as
FRAP value = = [(A1 − A0)/(Ac − A0)] × 2, where Ac is the absorbance of the positive control, A1 is the absorbance of the sample, and A0 is the absorbance of the blank.
Some other papers refer to calculate FRAP value as
FRAP value will be Trolox equivalent using Y=mx+c equation.
Please let me know the original process for the FRAP value calculation.
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I have conducted the second method in my research. You may refer to my paper
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Methanol and ethanol plant extracts of lemongrass, centella asiatica and moringa oleifera not showing activity in the varied concentration of lower to higher concentration 300mg/ml, 500mg/ml and 400mg/ml from the stock taing 50 100 150 and 200 microlitre) using disc and agar well diffusion method. tested organism is E.coli, Bacillus and staphylococcus aureus. Even after the review of literature of the related paper and following same methodology we not getting results please let me know where we lagging?
Thanks.
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Try using lower concentrations like 10mg or 20mg initially. Sometimes, higher concentrations yield no results, whereas lower concentrations can provide better outcomes. Ensure you properly filter your extract before conducting any biological assay.
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I want to perform Antioxidant assay for Iron oxide NPs synthesized through green synthesis method from leaves extract and also wants to check the antioxidant capability the plant extract which is used the synthesis of these NPs. I have also used Ascorbic acid as standard antioxidant.
Thanks!
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The DPPH assay is "unusual" because the antioxidant sample causes a decrease not an increase in absorbance. OK. Let me speak about normal antioxidant assays where antioxidant increases color. In that case "your problem" would be restated.. [Why i get control value(2ml methanol+1ml **** reagent 0.1mM SOL) higher then our sample ie, plant extract and Nanoparticles) in antioxidant assay?]. In this case the control would be exhibiting a reaction (apparent antioxidant content) which should not be. A faulty control is usually quite difficult to produce - provided THE CONTROL is identical in every way as the test sample. The only difference should be that the test sample is replaced with the same volume of solvent (which you seem to do). You also seem to be using 3.1 ml total volume (cuvette or test tube) not a microplate. I agree with Dr Nimashi Herath that DPPH degradation (apparent antioxidant results) occurring in the control perhaps due to sunlight exposure. Another point is that: impure methanol contains trace metal ions which are redox active. However, provided that the control is made-up exactly like the general assay using all the same reagents, these errors should cancel out. I agree with Dr Yurii V Geletii that this is truly perplexing. My short-hand advice is, to prepare a control experiment alongside of each and every assay: same solvents, same reagents, same cuvettes, same instrument (please allow to warm up and check the zeroing with water frequently). Check the control gives the same absorbance readings (vs. air or water blank) at the start and END of your analysis. Good luck.
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Please provide the full protocol as well.
Thank you!
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Estimation of total polyphenolics
The reaction mixture contain 50 μl of sample, 3 ml water, 0.25 ml FC reagent and 0.75 ml 20 % Na2CO3. The total volume make up to 5 ml using water. Mixed well and incubated the mixture at 50°C for 2 hours. Read the absorbance at 765 nm using spectrophotometer [23]. Here gallic acid was used as the standard. The concentration of total polyphenolic content was obtained from gallic acid standard curve by using the following formula.
T = C × V/M
T = Total polyphenolic content expressed as mg/g of the sample extract in GAE
C = Concentration of Gallic acid from caliberation curve (mg/ml)
V = Volume of extract (ml)
M = Weight of sample extract (g)
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2 months ago Plant extracts dissolved in 10% DMSO may be used for experimentation or they may lose their activity?
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yes you can use the pre-dissolved plant extract, but you need to Store the extracts properly in a -20 refrigerator for avoiding the unwanted growth of microorganisms and degradation of active constituents.
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Could I use O-nitro- phenyl-a-D-glucopyranoside or maltose instead p-nitrophenyl-a-D-glucopyranoside as a substrate in a-glucosidase inhibition by plant extract?
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Ok thank you Sir Aqib Khan
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I have to carry TLC to identify compounds in plant extract
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Most silica on TLC is 60 A pore size. If you run standard references with your extract, pore size doesn't matter since the references and your compound(s) are run under the same conditions.
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How to avoid smear DNA in plant extraction by CTAB protocol
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The results demonstrated that sodium acetate precipitation and oligo (dT) improved the quality of the extracted DNA significantly (p < 0.01). Also, sodium acetate precipitation, using oligo (dT), incubation at 70 °C and SDS treatment increased the quantity of DNA significantly (p < 0.01).
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I have prepared plant extract in methanol and ethanol and have preserved in DMSO solution
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Processing plant extract DMSO solutions for the identification of phytochemical compounds typically involves a series of steps. Here's a general outline of the process:
  1. Filtration: Start by filtering the plant extract to remove any solid particles or debris. This step ensures a cleaner sample for further analysis.
  2. Solvent Extraction: If the plant extract is in water or aqueous form, you'll need to perform a solvent extraction to transfer the phytochemical compounds from the aqueous phase into an organic solvent. Common organic solvents used for this purpose include ethyl acetate, chloroform, or dichloromethane. Mix the plant extract with the organic solvent and separate the two phases using separatory funnels or centrifugation. The organic phase will contain the phytochemicals of interest.
  3. Concentration: After obtaining the organic phase, evaporate the solvent using techniques like rotary evaporation or vacuum drying to concentrate the phytochemical compounds. This step reduces the volume and increases the concentration of the target compounds.
  4. Reconstitution: Once the solvent is evaporated, reconstitute the concentrated extract in a suitable solvent. In this case, since the initial solution was in DMSO, you can choose to reconstitute it in a different solvent like methanol or acetonitrile, which are commonly used for phytochemical analysis.
  5. Analysis Techniques: There are several techniques you can use for identifying phytochemical compounds in the reconstituted solution. Some common techniques include: a. High-Performance Liquid Chromatography (HPLC): HPLC is widely used for separating and identifying individual compounds in a mixture. It can provide information about the retention times, peak shapes, and relative quantities of the phytochemicals. b. Gas Chromatography-Mass Spectrometry (GC-MS): GC-MS is useful for volatile or semi-volatile compounds. It separates the compounds and provides information about their molecular structure through mass spectrometry. c. Liquid Chromatography-Mass Spectrometry (LC-MS): LC-MS combines the separation power of liquid chromatography with mass spectrometry detection. It is effective for analyzing a wide range of compounds, including polar and nonpolar substances.d. Nuclear Magnetic Resonance (NMR): NMR spectroscopy can provide valuable structural information about phytochemical compounds.
  6. Data Analysis: After obtaining the analytical results, compare the obtained spectra or chromatograms with available databases, such as spectral libraries or published data, to identify the phytochemical compounds present in the plant extract.
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The plant was extracted by mixing 60g of powdered moringa oleifera into 300 mL of distilled water via the boiling method for 10 mins. Then the extract is filtered. The filtrate will be used to mix with AgNO3 (1mM). Now I have to come up with multiple concentration, but how do I do so?
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Freeze dry your extract and take the weight to get exact concentration of your extract. Then you proceed to working out the different concentration you need with the 1mM AgNO3
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Actually i am curious that how plant extract is helping in the synthesis of nanoparticles. Plant extract is basically the combination of lots of organic chemicals and when we are using that extract for the synthesis then which organic chemical is actually playing role in synthesis and where the other organic chemicals will go? That question is bothering me alot. if those other organic chemicals are present with the nanoparticles then can we claim the effects are because of nanoparticles? Please help me out.
Regards
Dr. Farhat Yasmeen
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Hi Farhat,
The specific mechanism and behavior of nanoparticles synthesized using green methods can vary depending on the plant extract, target metal ions, reaction conditions, and other factors. It is advisable to consult relevant research studies and scientific literature for more detailed information on specific systems and their mechanisms:
You need to keep in mind the key ingredients for preparing nanoparticles via plant extracts:
  • Reducing Agents
  • Stabilizers
  • Capping Agents
Plant extracts contain a diverse range of biomolecules, such as phenolic compounds, flavonoids, alkaloids, terpenoids, and proteins. These biomolecules can act as reducing agents, stabilizers, or capping agents during the nanoparticle synthesis process.
Best regards
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Fifty milligram of methanol extract fraction were weighed separately and dissolved in 100 ml of methanol to get 500 μg/ml stock solution. From the stock solution how to prepare different concentration like (10, 20, 40, 80 or 160 μg/ml) or
10 mg of sample dissolved in 100 ml of methanol to get 100 μg/ml stock solution. From the stock solution how to prepare different concentration Like (2, 4, 6, 8 or 10 μg/ml)
please help with the calculation.
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To make various concentrations (10 ug/ml, 20 ug/ml, 30 ug/ml) from a 500 ug/ml stock solution, you can follow these steps:
  1. Calculate the volume of the stock solution (500 ug/ml) needed to achieve the desired concentration using the formula: C1V1 = C2V2.
For a 10 ug/ml solution:
C1 = 500 ug/ml
V1 = ?
C2 = 10 ug/ml
V2 = 1000 ul (1 ml)
Substituting these values into the formula: 500 ug/ml x V1 = 10 ug/ml x 1000 ul
Solving for V1: V1 = (10 ug/ml x 1000 ul) / 500 ug/ml = 20 ul
To prepare a 10 ug/ml solution, take (1000 ul - 20 ul) = 1980 ul.
Then, add 20 ul of your stock solution (500 ug/ml) to 1980 ul of water or any desired solvent. This will result in a 10 ug/ml solution.
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Plant DNA extraction methods
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Here is the brief regarding your question. For 100% ethanol-> 1 A decrease in ionic dissociation at lower dielectric constants in the presence of ethanol is considered to be the mechanism that underlies DNA precipitation.
And if I talk about the CTAB buffer that facilitates cell lysis and it prevents the secondary metabolites from interfering with DNA extraction and downstream procedures.
In conclusion, 98% ethanol would be 1st chance in which you might be get the results Charles Ologidi
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in field of drug designing
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Methanol is used for extraction of medicinal plants due to its lower boiling point, higher volatility, and higher extraction efficiency (depending on the desired secondary metabolite composition). Methanol is also used as a co-solvent to enhance extraction efficiency in supercritical fluid extractions.
Although the toxicity of methanol at high doses is well established, less is known about potential adverse effects from lower levels of exposure over a long period of time, which often is the case with methanol-containing herbal extracts.
Methanol is normally present in the human body as a naturally occurring byproduct of protein formation. According to the International Programme on Chemical Safety Poisons Information Monograph, the normal blood methanol concentration in humans is approximately 15 mg/L (range 2-30 mg/L).
You may want to refer to the link provided below.
International Programme on Chemical Safety. Poisons information monograph 335. May 2002. Available at https://inchem.org/documents/pims/chemical/pim335.htm
Best.
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Does anyone know a protocol to induce inflammation in transwell Caco-2 cells? I'm having difficulty finding a strong and consistent model for that.
After 21 days of Caco-2 monolayer differentiation in transwell plates, my idea is to induce inflammation using LPS (1 microgram/mL) on the basolateral side. Studies however, present different ways of doing this: (a) by applying LPS to both sides (apical, basolateral) or (b) by applying LPS to only one of the sides (apical or basolateral). Also, many dosages are used by studies, varying from ng to micrograms.
Therefore, I'm very confused regarding which dosage of LPS to use and the compartment (apical, basolateral) of choice. If anyone has done this successfully, please let me know.
Thank you so much,
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Hello
LPS is not a good way to induce inflammation in Caco-2 cell line. TNFa + IFN 50ng/ml each at basal side is a better way
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Actually this is how i do. 150mg (pure extract) dilute with 3ml=3microlit (DMSO) will get 50mg/ml(stock solution). How can i calculate the concentration?
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Feel free to answer
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Plant extracts experimental animals
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Yes, it's very possible depending on what you want to achieve. To carry out an in-depth and excellent study, group your animals thus:
Group 1 : Normal control
Group 2: Positive Control (diseased group)
Group 3: Standard control (treated with drug from the market)
Group 4: 100mg/kg of Extract A
Group 5: 100mg/kg of Extract B
Group 6: 100mg/kg of Extracts A and B.
Group 7: 200 mg/kg of Extract A
Group 8: 200mg/kg of Extract B
Group 9: 200mg/kg of Extract A and B.
You can as well create more groups for higher doses such as 300mg/kg, 500mg/kg, etc., depending on the scope of your work. The whole essence of this is to ascertain whether the effect of the extract is synergistic and dose-depebdent.
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I do the cytotoxicity test on plant extracts and I get the % of Cell growth as function of concentration. I know to calculate the IC50 from the % of inhibition according to the concentration. But I don't know to calculate this IC50 from the % of Cell growth
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is it possible to get any other compound in plant extract using hptlc which is not recorded in gc ms for the same plant?
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Yes, it is possible to detect compounds using high-performance thin-layer chromatography (HPTLC) that may not be recorded in gas chromatography-mass spectrometry (GC-MS) analysis of the same plant extract.
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I an trying to elute secondary metabolites from plant extract via column chromatography ( silica slurry method).But unfortunately, I got uneven extract distribution in column which is not moving further. It is stucked. Hexane: ethyl acetate is using as a mobile phase . I packed column very efficiently but don't know what is the matter?
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Plant extracts contains several components that could reduce the efficiency of your separation. Firstly, you have to ensure removing pigments, sugars, protein by using physical methods or liquid-liquid extraction so that you have fractions that contain less secondary metabolite to simplify the separation otherwise you would have to do a lot of sub-columns. Also from I can see your loaded sample might be too much for the packed column, there is golden role in separation that for easy to moderate separation for each gram you should have to use 25-50 gm silica for packing while in complex separation you should use upto100 gm silica this could be determined by the behavior of the compounds in TLC. pay attention for the flow rate to avoid diffusion of the bands if it is too slow or too fast. good luck
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If we should calculate it by experimental test on target organism or we should find it mathematically?
co- toxicity factor =(O-E)*100/E
that
O is observed % mortality of combined plant extracts
E is expedcted m% mortality
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In the context of the co-toxicity factor formula, the term "expected mortality" refers to the predicted or estimated mortality rate of an organism under the combined effects of multiple toxic substances. The co-toxicity factor formula is used to assess the combined toxicity of different substances on an organism, taking into account their toxicities.
To calculate the expected mortality using the co-toxicity factor formula, you typically follow these steps:
  1. Determine the individual toxicity values: Obtain the toxicity values or toxicological data for each of the substances of interest. This could be in the form of lethal concentration (LC50) or lethal dose (LD50) values, which represent the concentration or dose at which 50% mortality is expected.
  2. Calculate the co-toxicity factor: Calculate the co-toxicity factor for each substance by dividing the concentration or dose of the substance by its individual toxicity value. This step involves normalizing the concentration or dose of each substance concerning its toxicity.
  3. Calculate the expected mortality: Sum up the co-toxicity factors for all the substances. The resulting value represents the expected mortality of the organism under the combined effects of the substances.
It's important to note that the co-toxicity factor formula is a simplified approach to assess combined toxicity and may not account for all possible interactions between substances. The formula assumes an additive or independent effect of the substances. In reality, interactions between substances can be more complex, including synergistic (enhanced) or antagonistic (reduced) effects.
Furthermore, the specific formula or equation used for calculating the co-toxicity factor may vary depending on the context, study design, and toxicological data available. It is essential to consult relevant literature, regulatory guidelines, or expert advice to ensure the appropriate use of the co-toxicity factor formula and interpretation of the results in your specific research or assessment.
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Experimental IC50 value is required to determine the synergistic activity of plant extracts in combination.
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based on my experience at first you should select at least 6 or 7 concentration of your toxin (for example 0, 0.5, 1, 1.5, 2, 2.5, 3 %) and do an experimental test on your target organism. after that you should count number of mortality per each concentration and for finding LC50 you should enter data of mortality, concentration of toxin and total number of target organism in data sheet of SPSS and use analysis of probit regression. Software will calculate LC50 for you.
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Hi every one.
Please help me.
I have a dry plant extract after evaporation from ethanol 70% extract.
I need to dissolve it in solvent for nitric oxide testing on RAW264.7.
But the problem is my dry extract isn't completely solube in DMSO 100%.
So what DMSO concentration (in water) should I use to dissolve it?
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You should initially test with a small amount of extract, how much water it needs to dissolve completely, if it is not possible to dissolve it in water. Then you would not be able to make the mixture with DMSO, as the insolubility in the DMSO/water mixture would persist.
I have not worked with cells, and what I do in in vitro molecular assays, is to prepare a stock solution with the same extraction solvent (70% ethanol), and from the stock I prepare dilutions in the test solvent (in this case it would be with DMSO). If the ethanol residues found in these dilutions do not affect cell viability, this could be a working option.
The other option, although I have never worked with it, is to prepare the stock dilution with DMSO-ethanol, i.e. the minimum amount of ethane that dissolves the whole sample and then complete a volume with DMSO. From these prepare the dilutions in DMSO. In this case you will also find traces of ethanol in the sample.
The last case would be to work directly with the aqueous extracts of the plant samples.
You can also change the use of ethanol to methanol. Again, cell viability should be checked.
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I am working in my PhD about one medicinal plant doing extraction and isolation the phytochemical and check their biological activities and the last objective of my work Biosynthesis of ZnO Nanoparticles using same plant extract as a reducing agent and a stabilizing agent then charcterisation the ZnO NPs and check their antimicrobial antioxident activites. Is that ok or it is not mached?
Is the green ZnO NPs activity will differ from plant to other plant extract?
Thank you in advance
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Thank you Dr/ Tania Brito
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Plant extracts, Animal model
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Asthma is a chronic respiratory condition characterized by airway inflammation, bronchial hyperresponsiveness, and reversible airflow obstruction. Animal models, including rats, have been widely used to study various aspects of asthma and evaluate potential treatments. Here's some insight into anti-asthma studies using rats as a model:
  1. Induction of Asthma in Rats: Researchers commonly induce asthma-like symptoms in rats using different methods. One approach is sensitizing rats to specific allergens like ovalbumin, house dust mites, or pollen. This sensitization is typically followed by repeated exposure to the allergen, leading to an allergic response and airway inflammation similar to human asthma.
  2. Airway Inflammation: Rats with induced asthma-like symptoms often exhibit airway inflammation characterized by increased infiltration of inflammatory cells, such as eosinophils, neutrophils, and lymphocytes. This inflammation is accompanied by elevated levels of pro-inflammatory cytokines and chemokines, which contribute to airway remodeling and hyperresponsiveness.
  3. Bronchial Hyperresponsiveness: One hallmark of asthma is bronchial hyperresponsiveness, where the airways become overly sensitive to various stimuli. In rats, researchers measure this by assessing the increase in airway resistance or changes in lung function in response to bronchoconstriction agents like methacholine or histamine.
  4. Therapeutic Interventions: Rats are used to evaluate the efficacy of potential anti-asthma treatments. Various interventions, including pharmaceutical drugs, natural compounds, and immunotherapies, are tested in rats to assess their ability to alleviate airway inflammation, reduce bronchial hyperresponsiveness, and improve lung function.
  5. Assessment Parameters: Researchers utilize several techniques to evaluate the effectiveness of treatments. These include histological analysis of lung tissue to examine cellular infiltration, mucus production, and airway remodeling. Lung function tests, such as spirometry and plethysmography, measure parameters like forced expiratory volume, peak expiratory flow, and lung resistance.
  6. Pharmacological Studies: Rats are used to investigate the pharmacokinetics and pharmacodynamics of anti-asthma drugs. These studies help determine the optimal dosage, formulation, and administration route for potential therapies.
  7. Genetic and Molecular Studies: Rats have been genetically modified to mimic specific aspects of human asthma, allowing researchers to study the contribution of certain genes or molecular pathways to the development and progression of the disease.
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It is required to determine synergistic activity of plant extracts?
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The experimental IC50 value is an important parameter for assessing the potency of a substance in inhibiting a biological function. It is used to determine the synergistic activity of plant extracts in various applications, such as antimicrobial, anti-inflammatory, and antioxidant activities.
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Please suggest me plant extract/material for adsorption of heavy metals from contaminated water
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Various plant extracts and materials have the potential to adsorb heavy metals from polluted water. Here are some recommendations based on the search results:
-Cellulose Schiff Base, derived from Safflower stem wastes, is a bio-based polymer ligand suitable for studying metal adsorption.
- Microbial and plant-derived biomass are viable options for eliminating heavy metals from wastewater.
-Activated carbon is a widely accepted adsorbent for removing heavy metals from water.
-Chitosan, a biopolymer, is effective in removing heavy metals from wastewater.
-Algae can be employed for biosorption to remove heavy metals from wastewater.
-Peat moss is a suitable adsorbent for removing heavy metals from wastewater.
It should be noted that the efficiency of these materials depends on factors such as the type and concentration of heavy metals, water pH, and the properties of the adsorbent material.
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I am working in my PhD about one medicinal plant doing extraction and isolation the phytochemical and check their biological activities and the last objective of my work Biosynthesis of ZnO Nanoparticles using same plant extract as a reducing agent and a stabilizing agent then charcterisation the ZnO NPs and check their antimicrobial antioxident activites. Is that ok or it is not mached?
Is the green ZnO NPs activity will differ from plant to other plant extract?
Thank you in advance
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If you compare well-purified ZnO nanoparticles of the same size obtained with different extracts, then their properties should not differ. However, you know that in different extracts there will be different substances and they will affect the shape, size, adsorption of other molecules. Sometimes it happens that it is not possible to obtain the same nanoparticles. Everything must be proved by their characterization.
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Actually i used plant extract to determine whether there is antibacterial activity or not.
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In my own opinion, why going for expired blank antibiotic disc. Go for unexpired sterile plain disc and embed your plant extracts. You can equally perforate filter paper, sterilize and use.
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I have gone through several literature where all of them prepare powder from nano particle solution after preparation of nanoparticles solution using plant extract. If we think about the application of nanoparticles, Why we create powder rather using the liquid solution (Aqueous solution can be considered) ?
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Md. Shoebul Islam While powders are convenient for transport and storage there are no discrete, independent, separate particles < 100 nm in a powder. This is due to solid-solid diffusion at the nano scale. To retain the nano nature )100% < 100 nm) of the particles then they must be preserved in colloidal dispersion. Try measuring the specific surface area of the powder by BET. It should be greater than 60 m2/cm3 for the particles to be considered less than 100 nm. or further information view this webinar (free registration required):
Dispersion and nanotechnology
Also see plenty of discussions on Research Gate on this topic.
2 quotes from those much greater than I:
'I think dry nanotechnology is probably a dead-end' Rudy Rucker Transhumanity Magazine (August 2002)
If the particles are agglomerated and sub-micron it may be impossible to adequately disperse the particle… ‘The energy barrier to redispersion is greater if the particles have been dried. Therefore, the primary particles must remain dispersed in water...’ J H Adair, E. Suvaci, J Sindel, “Surface and Colloid Chemistry” Encyclopedia of materials: Science and Technology pp 8996 - 9006 Elsevier Science Ltd. 2001 ISBN 0-08-0431526
See also a recent question:
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Hello, I am a doctoral student interested in interpreting UPLC-MS results on a plant extract. My question is that I can rely on ICT and the masses obtained only for the identification of molecules. another thing a peak on the chrommatogram UPLC what do you mean on the TIC ?? thank you
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Hello everyone,
thank you for explanation. Please how can I measure this time delay?
Thank you
All the best,
Radka
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I am currently doing compound isolation from plant extract. All the apparatus used were clean.
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Hi Tey,
Perhaps because your product still contains impurities. Therefore, you need to purify your product. If tlc cannot improve the purity of your product, you can use other purification methods such as recrystallization, distillation, or use instruments such as gc-ms.
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I have performed toxicity studies of plant extracts (ethanolic) and no signs of toxicity are observed. I need to complete an experiment on three groups and I am confused about what dose to prepare for the experiment.
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Hi Prabhat! I'm assuming you have seen no toxicity with your extracts up to at least 2000 mg/kg. I would suggest you do the following if your plant/extract has been used in any traditional system of medicine for any indication (this is very likely) 1)Identify the human dose 2) Calculate the animal equivalent dose using the appropriate conversion factor for rats/mice. 3) Since you need three doses consider that as the median dose and the other two doses as half and double respectively. This may increase your chances of seeing efficacy in your animal studies. All the Best!
(Nair AB, Jacob S. A simple practice guide for dose
conversion between animals and human. J Basic Clin Pharma 2016;7:27-31.)
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The bioactive compound need not be damaged and the purpose of the extract is to prepare transparent film.
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Dear Scholar,
You may pass the methanol solution through cotton plus topped with activated charcoal. An HPTLC comparison of unfiltered methanolic extract and clarified methanolic extract to assure the phytochemical fidelity of both.
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I am conducting research in which I will be using a plant extract and infusing it into a wet wipe to fight the growth of bacteria and stop the spread of infections. I need to find a way to remove the odor and stain from the leaf extract to be used and infused in the wet wipe.
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Once upon a time, we removed chlorophyll from the extract by filtering through a carbon filter (activated carbon, sold in a pharmacy). Perhaps this will suit you?
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The theoretical IC50 value is required to determine the coefficient of interaction to see if the interaction between different combination of plant extract is synergistic or antagonistic.
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The IC50 value represents the concentration of a substance that inhibits 50% of the target activity. In the case of the DPPH assay, the IC50 value represents the concentration of the antioxidant substance that is needed to scavenge 50% of the DPPH free radicals.
To determine the theoretical IC50 value for the DPPH assay, you can perform a dose-response curve using different concentrations of the antioxidant substance. The percentage of inhibition can be calculated by comparing the absorbance values of the sample and control (DPPH only). The data can be plotted as a graph of inhibition percentage against the concentration of the antioxidant substance. The concentration that causes 50% inhibition can be determined from the curve and is considered the theoretical IC50 value.
Here are the general steps to determine the theoretical IC50 value for the DPPH assay:
1. Prepare a series of dilutions of the antioxidant substance in a suitable solvent (e.g., methanol, ethanol, or water).
2. Prepare a DPPH solution in a suitable solvent at a fixed concentration (e.g., 0.1 mM).
3. Add a fixed volume of the DPPH solution to each well of a microplate.
4. Add a fixed volume of each dilution of the antioxidant substance to the corresponding wells of the microplate.
5. Incubate the microplate in the dark at room temperature for a fixed period of time (e.g., 30 minutes).
6. Measure the absorbance of each well at a suitable wavelength (e.g., 517 nm) using a microplate reader.
7. Calculate the percentage of inhibition using the following equation:
% inhibition = [(Acontrol – Asample) / Acontrol] x 100
where Acontrol is the absorbance of the DPPH solution without the antioxidant substance and Asample is the absorbance of the DPPH solution with the antioxidant substance.
8. Plot the percentage of inhibition against the concentration of the antioxidant substance.
9. Determine the concentration of the antioxidant substance that causes 50% inhibition (theoretical IC50 value) from the dose-response curve.
It's important to note that the theoretical IC50 value may differ from the actual IC50 value due to experimental variability and the specific conditions of the assay. Therefore, it's recommended to perform replicate experiments and statistical analysis to obtain more reliable results.
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my plant extract shows less antioxidant activity (by DPPH assay) in medium doses. what could be the reason for it?
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Dear Yasha Jha,
Reaction mixture containing different concentrations of HAE (hydroalcoholic extract) of extract (25, 50, 75 & 100 µg/mL) was added to a DPPH reaction mixture. The reaction mixture was shaken overwhelmingly and kept in the dark condition at room temperature for 30 minutes. The absorbance of the reaction mixture was measured at 517 nm spectrophotometrically. The absorbance of every reaction mixture was recorded in triplicate. The scavenging capabilities of DPPH radical were given in the percent inhibition formula using the following equation.
% inhibition= [1- (AsAb)/Ac] × 100
Where, Ab represents blank absorbance
As stands for the sample absorbance
Ac is the control absorbance
Results were given in IC50 value, a concentration at which half of the radical’s generation was scavenged by the respective plant extract obtained from the percent inhibition value of samples.
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I am working on some plants e.g Picralima nitida, this plant is very bitter, what can I do to remove the bitterness?
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I know activated charcoal for odor removal in extract, but for taste I doubt however if you are to treat with mouse or rats the use of gavage or better weigh extract and pellet, shield pellet with starch powder n dry. You can try the pure extract dissolved in water if soluble and inject via syringe Intramuscular for a rat and observe, then dissolve pulverized pure extract in 0.5ml lidocaine n inect Intramuscular n observe too. Depending on what you are investigating lidocaine might affect your investigation.
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I want to make a concentration of plant extract since I don't have any established data for my research which is C. roseus as antibacterial cream. Thank you and I hope you will help me. Our final defense is approaching but I still have issues in my paper.
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Dear Scholar,
You will be using any positive control like known antibiotics also while performing either disc o well dilution studies. The MIC of the positive control can be traced out. So prepare the extracts in the following way.
01. 50 % less extract to the MIC of positive control
02. 25 % less extract to the MIC of positive control
03. Exactly equal quantity of the MIC of the positive control
04. 25 % more extract to the MIC of positive control
05. 50 % more extract to the MIC of positive control
From the results and if required you can fine tune the experiment again.
With regards,
Dr. Rajesh S Mony
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How can I prepare samples for GC-MS from plant extracts (Petroleum ether, CHCl3 and Methanol)?
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According to the expected type of secondary metabolite, the solvent should be selected with the relevant physical and chemical characteristics. Keep in mind that before the GC analysis, the analyte must be prepared using an appropriate solvent ratio.
Regards
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Which standard should I use to do HPLC to crude plant extraction, can I run HPLC without a standard?
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Saif Ali You are welcome.
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This is question is based on Green synthesis of plant materials using Silver Nitrate
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Sripathi Shubashini Thank you very much.
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The plant extracts were obtained by successive extractive maceration method from the crude plant, using n-hexane, chloroform, ethyl acetate and methanol. I intend to embark on the antiviral study of the respective extracts.
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It is always a good idea to rely on other researchers' published expertise that defines them as experts in a certain field of study and an equally good idea to duplicate these efforts like you are doing. Often times there is no need to reinvent "the wheel" and making ones own wheel furthers the science to use a cart analogy (whether it is pulled by man, beast, or it being part of a mechanized device).
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Bio-agents means parasites, predators etc, Bio-pesticides means Bt, beauveria etc microorganism formulation and plant extracts or formulation of animal origin
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Biocontrol is also costly and that is why farmers are not interested to apply biocontrol. More and more research is needed.
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Bioagents-- like predators, parasitoids etc
Biopesticides -- like microbial , plant extract , animal origin
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In my opinion biopesticides are more effective for pest control than bioagents
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I am using biphasic solvent (mixture of chloroform, methanol, water) to do the plant extraction. I am now facing problem in concentrating the supernatant, may I know is there any method to concentrate the supernatant without using vacuum centrifuge concentrator? Thank you for answering my question.
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Hi!
I'm currently working in thin layer chromatography of some plant extracts for Camptothecin (CPT) content.
Which of the two standards should I procure?
(S)-(+)-Camptothecin ≥90% (HPLC), powder?
or
Camptothecin phyproof® Reference Substance?
Thank you in advance!
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Both standards contain (S)-(+)-Camptothecin as a major component but usually HPLC grade has a higher purity (>99%). However, your samples may contain some (R)-Camptothecin and a separate peak (thus no matrix matching).