Science method
Precipitation - Science method
. Precipitation occurs when a local portion of the atmosphere becomes saturated with water vapour, so that the water condenses and "precipitates," in the form of rain, drizzle, sleet, snow, graupel, or hail.
Questions related to Precipitation
I have 2 2 2-trifluoroethyl methacrylate polymer solution and I want to separate polymer from solvent , I used methanol but my polymer solution in methanol seemed cloudy . How can I precipitate polymer? which solvent is appropriate?
Hello! I am currently running a western blot using human AD tissue samples. I prepared these samples over a year and a half ago. I am having trouble standardizing these proteins with Beta Actin. I have ruled out other parameters that could be causing the problem. Therefore, I am wondering if my tissue samples are no longer reliable. In addition to this, I noticed that when i thaw my samples, there is a good amount of precipitation. I just vortex and spin down to mix the samples thoroughly.
For my results, I keep seeing bands stuck in the wells and multiple faded bands. Of course when I first ran these proteins, the beta actin signal was clean and neat.
If someone could please elaborate on what could be causing this. In addition, I would appreciate if you could provide how long samples last and if there is a way to troubleshoot this.
Thank you!
P.S. Samples have been stored in -20 C fridge.
Hi, all
I am doing the liposome flotation assay. In the end, I precipitated the protein and then ran the sds-page. But every time I could not see my protein in the gel, it was almost gone, maybe just like a shadow. I asked my colleagues, and they said something wrong happened during my precipitation. I want to find the reasons. Please provide some suggestions for me.
Here is my TCA precipitation protocol:
1. add 1 volume TCA to 10 volumes of my sample, and incubate 30min at 4C
2. centrifugate at 15000rpm, 20min, 4C
3. discard supernatant, and wash with acetone two times (then centrifugate at 15k, 5min, 4C)
4. remove acetone carefully; avoid touching the white precipitation
5. air dry overnight
6. dissolve in 2X loading buffer for SDS-page on the second day
Thank you!
April
I'm trying to remove acrylamide and lactide from the medium that didn't react to form the macromonomer
i am refolding protein by gradient dilaysis in which i gradually decrease concentration of urea by gradient dialysis. however im not getting surety wheather denaturant has been completely removed from my protein or not.No precipitation has been observed throughout dialysis.
Does the concentration of CO2 gas in the atmosphere cause warming of the earth's atmosphere? Or does it lead to less rainfall when it warms up? Or does the warming of the earth's atmosphere lead to an increase in rainfall on the earth's surface?
Equilibrium Climate Sensitivity (ECS) is the global mean change in surface temperature for a doubling of CO2 from the pre-industrial (PI) value. ECS is one of the key metrics used in assessing future global warming, and therefore plays a very important role in climate change related policy-making. One important question in this regard is how ECS changes in a warmer world. Several studies found that ECS increases at higher CO2 concentrations (e.g., Bloch-Johnson et al., 2021; Colman & McAvaney, 2009; Gregory et al., 2015; Meraner et al., 2013). And, more recently, Mitevski et al. (2021) found a non-linear and non-monotonic dependence of ECS on CO2 concentrations. In addition to the surface temperature response, the precipitation response is another critical aspect of climate change. To evaluate precipitation changes, the key metric used is Hydrological Sensitivity (HS). HS is defined as the difference in global mean precipitation per one degree of global mean temperature change from the PI control state. Previous studies have explored the response of the hydrological cycle to global warming by examining HS in terms of the global energy budget, and have described the mechanisms affecting it (e.g., Allen & Ingram, 2002; Held & Soden, 2006; Jeevanjee & Romps, 2018; O'Gorman et al., 2011). The fact that HS is energetically constrained means that the precipitation response can be separated into fast and slow components. The fast response depends only on the CO2 concentrations in the atmosphere, before the surface temperature has time to warm, and results in a decrease in precipitation. The slow response, in contrast, is associated with surface warming, and results in an increase in precipitation (Andrews et al., 2010).
Reply to this discussion
James Garry added a reply:
Mr Kashani,
You have written two rather facile queries, and part of a third.
"Or doe"
Abbas Kashani added a reply:
Does the concentration of CO2 gas in the atmosphere cause warming of the earth's atmosphere? Or does it lead to less rainfall when it warms up? Or does the warming of the earth's atmosphere lead to an increase in rainfall on the earth's surface?
James Garry added a reply:
Abbas,
1) Yes, the rising carbon dioxide content of the atmosphere does lead to an increase in the surface and globally-averaged air temperature.
2) As the partial pressure of water vapour is a strong function of temperature (and that vapour is also a 'greenhouse gas') we expect to see a rise in the global humidity - that in various locales should result in more rainfall.
Neither of these are contentious matters and are well-addressed in the literature.
2)
Article More rain, less soil: Long-term changes in rainfall intensit...
I recommend Google Scholar.
Very useful.
When I precipitate a polymer, it forms a liquid precipitate. I want to obtain a solid form. I usually use methanol as the antisolvent. Can someone provide information about this situation...?
So I'm using TRIzol for RNA extraction, but suddenly I'm getting no pellet during the isopropanol step *even though I added glycogen.*
A few weeks ago I:
1. Took a large quantity of bacteria
2. Resuspended in TRIzol
3. Made a bunch of aliquots
4. Stored them all at -80
And those couple weeks ago, I was getting~50 ug of RNA per aliquot (with good RINs, and they looked great on RNA gels).
Yesterday, I took another aliquot and tried to prep it using the exact same process, and got nothing. No pellet appeared during the isopropanol precipitation step even though I added GlycoBlue.
I continued the purification to see if the pellet was just hard to see: ~0 ng/uL by nanodrop
Did I just make a pipetting error? Was my isopropanol bad? No: I repeated the repeated the process *again* with completely new sample, completely new isopropanol, and still no pellet at all.
I'm confident I'm lysing my samples well. I optimized the lysis a while ago, but even before optimization, my yields were never this bad.
I'm sure I added the GlycoBlue. I watched it diffuse into my sample.
I'm sure I added isopropanol. I watched the alcohol/water mix and used brand new isopropanol.
I'm sure I mixed the isopropanol/aqueous phase. I watched it carefully.
I'm sure I actually spun my samples. I tried it over and over.
Protocol:
1. Take bacteria+TRIzol aliquot from -80 (which used to give ~50 ug)
2. Lyse via bead beating (same beads, same bead beater, same settings, same duration that gave 50 ug in the past)
3. Add 0.2 V chloroform
4. Centrifuge 12k xg for 15 min
5. Take upper, colorless aqueous phase
6. Add 1 V of RT isopropanol
7. Add ~30 ug GlycoBlue
8. Invert a bunch of times to mix well
9. Incubate 10 min RT
10. Centrifuge ~20k xg for 10 min
Nothing. No pellet at all. Even with glycogen.
I tried spinning again: No pellet
How is this possible?
Does the concentration of CO2 gas in the atmosphere cause warming of the earth's atmosphere? Or does it lead to less rainfall when it warms up? Or does the warming of the earth's atmosphere lead to an increase in rainfall on the earth's surface?
Equilibrium Climate Sensitivity (ECS) is the global mean change in surface temperature for a doubling of CO2 from the pre-industrial (PI) value. ECS is one of the key metrics used in assessing future global warming, and therefore plays a very important role in climate change related policy-making. One important question in this regard is how ECS changes in a warmer world. Several studies found that ECS increases at higher CO2 concentrations (e.g., Bloch-Johnson et al., 2021; Colman & McAvaney, 2009; Gregory et al., 2015; Meraner et al., 2013). And, more recently, Mitevski et al. (2021) found a non-linear and non-monotonic dependence of ECS on CO2 concentrations. In addition to the surface temperature response, the precipitation response is another critical aspect of climate change. To evaluate precipitation changes, the key metric used is Hydrological Sensitivity (HS). HS is defined as the difference in global mean precipitation per one degree of global mean temperature change from the PI control state. Previous studies have explored the response of the hydrological cycle to global warming by examining HS in terms of the global energy budget, and have described the mechanisms affecting it (e.g., Allen & Ingram, 2002; Held & Soden, 2006; Jeevanjee & Romps, 2018; O'Gorman et al., 2011). The fact that HS is energetically constrained means that the precipitation response can be separated into fast and slow components. The fast response depends only on the CO2 concentrations in the atmosphere, before the surface temperature has time to warm, and results in a decrease in precipitation. The slow response, in contrast, is associated with surface warming, and results in an increase in precipitation (Andrews et al., 2010).
Dear Research Community,
I am encountering a significant hurdle in my research involving enzyme inhibition testing. The inhibitor I am investigating exhibits solubility exclusively in DMSO, rendering it insoluble in aqueous environments such as the 100mM phosphate buffer I am utilizing for enzyme kinetics studies. Upon attempting to incorporate the DMSO-dissolved inhibitor into the reaction mix, it precipitates out, leading to haze formation in the solution and hindering accurate data collection.
I am seeking insights and suggestions on how to effectively address this challenge. Specifically, I am interested in methodologies , or alternative solvents that could facilitate the integration of the inhibitor into the reaction mix without inducing precipitation. Additionally, any advice on modifying experimental conditions or buffer compositions to mitigate this issue would be greatly appreciated.
Thank you in advance for your expertise and assistance.
Hello,
I do IP using HA-tagged beads. One of my proteins through which I precipitate complex has HA-tag. I see this protein (with HA-tag) after IP. The signal is strong and bright.
The complex contains several proteins. For each protein I do separate western blot (I have different membranes for different proteins - I do not do re-probing). Proteins without HA-tag are not very abundant in the precipitated complex and I need use Clarity max (Femto) staining to see them. As a result I see as proteins that I try to detect as HA-tagged protein. The signal from HA-tagged protein is weak but it is still crucial for me because one of proteins that I am looking for has size slightly bigger than HA-tagged protein.
I tried to use true blot secondary antibody but it did not helped. I tried to use different primary and secondary antibodies, for example antibody fro HA-tagged protein is produced in mouse and I use anti-rabbit primary and secondary antibody for other protein of my interest but it did not helped.
I do blocking of membrane in 5% milk with tween-20. Primary and secondary antibodies are also diluted in milk. As an option I tried to block membrane and incubate with antibodies in 5% milk with TBS-T and wash it with TBST but it did not helped.
I cannot increase number of washes because I will loose proteins without HA-tag.
Does somebody has an idea how to solve this problem?
When mixing the Algal Trace Elements Solution for COMBO medium, I had the problem that there was insoluable precipitation before and after autoclaving (in several trials). (Re)heating and stirring could not do anything.
I am afraid the same will happen again as there are particles floating around after adding metal solutions before autoclaving. But I really do not know what I did wrong. I dissolved NaEDTA well in MiliQ water before adding FeCl3 to it, dissolving it als well and I carefully put in the metal salt solutions in given order, everything like I did before. Before I try it next again, I might need to change something... What do you think? Should I decrease the concentration of metals by a certain factor (maybe 10) and put in more of that in the final medium for the right end concentration?
Dear colleagues, we are now analyzing fecal samples with the MS but some precipitates occur after the SP3 digestion and elution. We are trying to understand the cause and identify ways to remove them as they harm the LC columns. Thank you for your help and your suggestions.
All the best
Giacomo
Tengo una columna de la variable de "precipitación" donde predominan los ceros y hay valores altos. No he podido transformarla para obtener una distribución normal, ya he usado métodos de log, log10(x+1), ln, sqrt, inversa, arcoseno, yeo-johnson, y no lo he conseguido. El obetivo de mi trabajo es determinar si variables del ambiente (precipitación, temperatura, luminosidad) afectan en las actividades del mono nocturno Aotus lemurinus (patron de actividad, dieta, rangos hogar y área núcleo), el análisis se quiere hacer mediante LMM. Como podría obtener normalidad en la distribución de esa variable ?
I purified a protein containing His tag via Ni-NTA chromatography wherein the protein was eluted in elution buffer containing 500mM imidazole, 50 mM Tris, 500mM Nacl. Since my next step of purification was Ion exchange chromatography, I dialyzed the protein in dialysis buffer containing 50mM Tris and 5mM beta mercapthoethanol. However, in the third round of dialysis, I observed extreme precipitation of the protein.
Kindly let me know what can be done to reduce the precipitation.
Hello everyone, I am trying to create a simple model using the HEC-HMS to obtain the value of runoff volume and peak discharge for a river basin. The problem is I do not know which method (transform, loss, routing, baseflow, type of precipitation) should I utilize. Please suggest a suitable and simple model to run in HEC-HMS to get my desired data. Currently, the data that I have are precipitation data, stream flow data, terrain data, curve number, and LULC data.
Microbially Induced Carbonate Precipitation (MICP) utilizes the enzymatic activity of ureolytic bacteria to transform urea into carbonate ions, which subsequently precipitate calcium carbonate (CaCO3) in the presence of calcium. This process can immobilize heavy metals through co-precipitation with CaCO3, reducing their mobility and bioavailability. Research investigating MICP for heavy metal immobilization focuses on understanding the role of both microbial processes, particularly urea hydrolysis by ureolytic bacteria, and the chemical reactions involved in co-precipitation, including the influence of various environmental factors.
I am doing protein estimation from fish tissue by Bradford's method but after adding the reagent cbbg- 50mg, ethanol-50ml, ortho-phosphoric acid- 100ml in 1L soln precipitating clot is shown even in the standard BSA solutiin. Each test tube contain. 0.1 ml sample+0.9 ml phosphate buffer+5ml bf reagent.
What is the TRMM satellite precipitation program? And how can it help humans?
as you know :
GPM can provide worldwide rain and snow data at any time
Using microwave and infrared technology. The TRMM sensor package has been expanded with GPM, which improves the ability to observe precipitation. GPM nuclear observatory to two-frequency radar i.e. Ku and Ka bands compared to TRMM four-channel high-frequency satellites from
As a result, the microwave radiometer increases the observability for light and solid precipitation. As a result, the GPM mission can provide more. These monthly in situ gauge data will be used in the final implementation. . This GPM satellite provides very accurate and detailed, for example, GPM rainfall measurements across India. GPM satellite data enables the researcher to study various hydrological applications such as climate research, drought monitoring, flood forecasting, agricultural planning. Etc . Uncertainty in satellite precipitation data caused by several factors including spatial and
study time scales; It has reported some key factors such as instrumental uncertainty, sampling uncertainty, recovery. Algorithm uncertainty, regional and topographic effects and side data are necessary to pay attention to.
I synthesized the polymer using DMF as the solvent. After synthesis, I precipitated the polymer in IPA. I think this solution is a colloidal solution. If my assumption is correct, how can I precipitate it?
We have expressed our protein in chloroplast when we add extraction buffer it get precipitate soon after centrifugation as this is real quick even we don't have a time to prepare sample for SDS-PAGE and Bradford. We have changed the buffers and tried Tris, HEPES, Phosphate and got some how comparable results with HEPES then we check the concentration variables of HEPES from 50mM to 100mM, EDTA from 10mM to 20mM, PEFA-BLOC (protease inhibitor) from 1 to 5mM but it does't working. We have tried TCA/Aceton precipitation, 8M urea treatment in both extraction and sample buffer but still the problem is there
my sample has Cu, Cd, Zn, NaOH, and H2SO4. I expected to see cu precipitation at this pH.
Hi!
I'm using the TRIsure method to isolate proteins and RNA from tissue (the procedure is similar to Trizol method). I usually store the RNA precipitacion with isopropanol at -20°C overnight for the next day I get the pellet. Could RNA be left in isopropanol more days, like all weekend, without effects on quality? Thanks
I am trying to isolate DNA from clay soils from a rice paddy field. With the standard protocol of the Power soil kit, it doesn't work at all, probably because the clay sequest the DNA and it is eliminated with the humic ácids and others.
I've tried to use 1M Phosphate buffer/15% ethanol as I've read in one article, but it doesn't work so well for us. Is a solution that precipitate and it forms some crystals that may contain the DNA, so after all the protocol, the yields of DNA are low.
Has someone some experience with that? Thank you!
Hello,
I am looking for the best downscalling technique to correct precipitation climate change dataset. I am not sure about which of these two methods is more robust for my task.
Thanks!
I want to downscale future precipitation data for my project but I have only 12 years data of observed precipitation data. Could anyone let me know if it is sufficient to use and would it generate appropriate future scenarios?
Dear all,
I am going to derive the precipitation data from NETCDF files of CMIP5 GCMs in order to forecast precipitation after doing Bias Correction with Quantile Mapping as a downscaling method. In the literature that some of the bests are attached, the nearest neighborhood and Inverse Distance Method are highly recommended.
The nearest neighbour give the average value of the grid to each point located in the grid as a simple method. According to the attached paper (drought-assessment-based-on-m...) the author claimed that the NN method is better than other methods such as IDM because:
"The major reason is that we intended to preserve the
original climate signal of the GCMs even though the large grid spacing.
Involving more GCM grid cell data on the interpolation procedure
(as in Inverse Distance Weighting–IDW) may result to significant
information dilution, or signal cancellation between two or more grid
cell data from GCM outputs."
But in my opinion maybe the IDM is a better choice because I think as the estimates of subgrid-scale values are generally not provided and the other attached paper (1-s2.0-S00221...) is a good instance for its efficiency.
I would appreciate if someone can answer this question with an evidence. Which interpolation method do you recommend for interpolation of GCM cmip5 outputs?
Thank you in advance.
Yours,
SO, I have data sets from 1980-2020 years of precipitation and temperature how to plot similar map? Not sure how to proceed, I have annual Precipitation for approximately 15 stations for my catchment. So, If i take average annual rainfall values it gives average annual map, if I am not wrong. then how to find the change in precipitation? should I use any formula to find the value for each station?
I was preparing a PDA media with different concentrations(200,500&1000ppm) of chromium chloride. But there would always be precipitate, the components are not mixing well. I tried hot stirrer to mix, but the result were same.
Hi everyone!
I want to work with CHELSA monthly time series (v 2.1).
After downloading all layers for a bunch of years' mean temperature and total precipitation I have noticed that precipitation values are significantly higher than what I would expect. Following the Technical Info I have divided the precipitation values by 100 to get kg per square meter but still, the values are very high and very different to any other model.
I do not know what I am doing wrong. Please help!
I'm focusing on bias-correction and downscaling the output of GCMs for the scenarios of the Coupled Model Intercomparison Project Phase 6 (CMIP6)—shared socioeconomic pathways (SSPs). I intend to do it for sub-daily rainfall (i.e. 3-hr rainfall). Thus, I'm interested to learn basically about the concepts, methodologies, considerations, technical approaches(i.e. any programming codes or software). Can anyone please help me in this regard? To be honest I'm a bit new in this field so some basic conceptions can also be very helpful. I intend to work in R so codes in R would be better. Which statistical approaches would be better? Like Quantile mapping or SDSM?
How do nutrients flow through the Earth's spheres and which of the processes that cycle matter through the biosphere is involved in the formation of clouds and precipitation?
Most studies have found that hydrolase activity is positively correlated with precipitation. What perspectives can we understand that the activity of hydrolase decreases after rainfall decreases?
Please help me. Suppose I am making ZnO nanoparticle. I used ZnSO4 salt and NaOH as reducing agent. Finally I got precipitation. Usually I need to centrifuge, wash and dry to get ZnO nanoparticle. But my question is- without drying, what is inside the precipitation after wash? Can I use this as nanoparticle?
Do you ever have precipitation problem during preparation?
I have daily precipitation data for 30 years and I calculated runoff using SCS CN method. My runoff is greater than my precipitation. What might have been the reason? How do I rectify this error?
I have a question, I have noticed that when I extract dna, in the last step when I resuspend in either 50 microliters of TE buffer or water, the total precipitated dna doesn`t solubilizes. I haved tried to incubate for one hour at 65º degrees but it doesn`t always work, does someone have some tip?
After acquiring TEM images, we could use Image software to determine size and projected area fraction of precipitates. However, TEM foil is indeed a three-dimensional object. How to determine the volume fraction of precipitates?
Adding lime in the process, apart from the formation of calcium sulfate compound in the neutralization stage with sulfuric acid,if have the negative effect on the precipitation process of metals from the leach solution?
Hello everyone,
I am trying to isolate antimicrobial peptides from plants. After precipitating the peptides with acetone, most of the pellet (peptides) did not dissolve. I used dH2O/PBS to dissolve the pellet. I do not want to use SDS or urea to dissolve the pellet because it will affect my cell culture experiment.
This is my peptides isolation protocol:
-The plant material was ground in a blender. For extraction, 10% CH3COOH (Acetic Acid) in the presence of a commercial proteinase inhibitor was added to the floured plant parts (added to the ground material at a ratio of 1:10 (w:v)).
- The extraction was carried out with continuous vigorous stirring for 1 h at room temperature. After 1 h, mixture was sieved; fine particles were separated by centrifugation at 4700 rpm for 10 min. The supernatant was filtered through a Whatman paper filter.
-Cold acetone (-70 °C) was poured into the filtrate at a ratio of 1:7 with gentle stirring; the mixture was then kept at +4 °C for overnight.
-After this time, the suspension was centrifuged at 4700 rpm for 10 min. The supernatant was removed and the resulting fraction was dried at room temperature. The dried precipitate was redissolved in dH2O or PBS.
When I tried to prepare a solution of enzalutamide of 1000 uM in cell culture medium from a solution of 1 M of enzalutamide in DMSO the drug precipitated. I've tried changing the pH and the temperature but without success. :( Any tips?
What is the next step i can move on to with this material to create some value-added product
I have downloaded 5 years daily precipitation data of MSWEP, but i havent succeded in subsetting it for Indonesia region and make pandas dataframe of it using python. Please advise?
I am trying to prepare a Ni-based catalyst(Ni/Ce2O3) by co-precipitation method. I was wondering what is the best precipitation agent and PH.
Is there a method or equations that can be used to proved the relationship between water content and precipitation?
In Water Resources Engineering, the sizing of reservoirs depends on accurate estimates of water flow in the river that is impounded. For some rivers, long-term historical records of such flow data are difficult to obtain. In contrast, meteorological data on precipitation have often been available for many yearst. Therefore, it is often useful to determine a relationship between flow and precipitation. This relationship can then be used to estimate flows for years when only precipitation measurements were made. For example, the following data are available for a river that is to be dammed:
Precipitation=[88.9 108.5 104.1 139.7 127 94 116.8 99.1]
Flow=[14.6 16.7 15.3 23.2 19.5 16.1 18.1 16.6]
How can I put the best line with linear regression to predict the annual water flow on the data?
if the drainage area is 1100 km2, estimate what fraction of the precipitation is lost via processes such as evaporation, deep groundwater infiltration, and consumptive use.
Hello! I need some guidance or clarification regarding the units for precipitation rate or precipitation intensity (esp. for rainfall). I'm used to precipitation intensity being expressed in millimeter per hour (mm h-1), but I noticed that reanalysis data generally express precipitation intensity in kilogram per square meter per second (kg m-2 s-1) which somehow confuses me.
I've read somewhere that when converting from kg m-2 s-1 to mm h-1, the value just have to be divided by 3600. And that in terms of precipitation amount/accumulation, 1 mm of rain is equal to 1 kg m-2. I knew that it has something to do with liquid water having a density roughly equal to 1 kg L-1, but the explanations were rushed so I'm still confused on how these two units are related to each other.
So, I would like to ask: how exactly do we convert precipitation rate from kilogram per square meter per second (kg m-2 s-1) to millimeter per hour (mm h-1), and vice versa? How does the dimensional analysis for these units work out, and what is the conversion factor for this? In addition, how exactly do we also convert precipitation amount from mm to kg m-2, and vice versa?
Thank you very much in advance!
Hello all,
I am currently trying to purify a fragment of the large surface protein of HBV however during purification I notice that a white precipitate form on the Ni-NTA column. (At pH 8.0; pI of protein = 6.97) I'm using a simple lysis buffer (50 mM imidazole, 50 mM NaH2PO4, 300 mM NaCl, (5% glycerol in some cases but no significant difference))
The protein was in solution in the cell lysate, ie before loading onto the column and the precipitate is confirmed to be my protein.
Washing and eluting at pH 8 resulted in a milky, cloudy white eluate.
Washing and eluting at lower pH of below 6 has helped to solubilize protein and the solution is clear.
For subsequent experiments I need to bind my protein to Ni-NTA carrying liposomes but as soon as my protein comes into contact with them it precipitates. The protein also precipitated when adding a bit of NiSO4 solution.
Any ideas as to how I can avoid this issue?
Why does a solution of 50mM Tris and 20mM CaCl2 sometimes precipitate?
This buffer is used for protein purification.
Hello! I have been trying to purify an antibody using protein A column chromatography but noticed that as soon as the antibody equate hits the neutalisation buffer (Tris, NaOH, ph 9) it forms a cloudy precipitate. Any advice?
Hi
I intend to model a thermal responde we measured with ERA5 variables, and later, use this model to predict the future responde with CMIP6 variables.
My doubt is, how to use precipitation correctly?
In ERA5 hour analysis total precipitation comes in meters acumulated in 1hour (so its m/h I suppose) and in CMIP6 comes in Kg/m2/s .
Kg/m2/s is the same as mm/s, so I'm wondering if turning ERA5 precipitation from meters/hour to mm/s and use that in a valid way?
Also, am I messing up units considering the grids are not even the same in both datasets?
Thank you!
Cheers, Luís Pereira.
We want to dope 1% mol of Fe3+ in MgO by precipitation method. All precursors are nitrate salts and NaOH is precipitant.
I'm trying to start modeling asphaltene precipitation. Since I read studies related to asphaltene precipitation, I have found that modeling with PC-SAFT equation of state is most appropriate.
However, I don't have any software or MATLAB code that can model VLE and LLE for the system with multicomponents.
Would you please recommend me some free software or code for PC-SAFT EOS?
Hi,
In the chloromethylation reaction of polysulfone (PSU), I am required to use paraformaldehyde and trimethylchlorosilane as the chloromethylating agent while stannic chloride as the catalyst. I followed the same protocol of many papers such as this one attached.
During the experiment, PSU was first dissolved separately in solvent (e.g dichloromethane and chloroform) then paraformaldehyde (PFA) was added in form of solid. For both solvent and at two different dissolution temperatures (25 and 60 °C), the PFA was not fully dissolved.
I tried to dissolve PFA separately in solvent than add it to the dissolved PSU, this slightly improved the degree of chlore in the produced chloromethylated PSU (C-PSU), however it was not dissolved and gelation as well as non-homogeneity was obtained. Moreover, the obtained C-PSU was not soluble in many solvents (e.g. NMP, DMAc, DMSO, Toluene, DMF), which can be caused by the low degree of functionalization ( -CH2Cl) and the precipitation of insoluble cross-linked polymer.
I am aware that PFA is
- slightly soluble in alcohol
- soluble via depolymerization by heating PFA in distilled water at 60°C followed by a titration with NaOH
Which I already tried and it was successful in terms of PFA dissolution. The problem is that I don’t want water in my reaction due to the future application of the system.
I would appreciate if you could help me to improve my system by providing some suggestions on how to achieve a good homogeneous PFA/solvent solution. Any ideas on how to increase the degree of chloromethylation of PSU are very welcomed.
Thank you
I want to identify a secretory protein that is secreted from min6 cell in the supernatant can anyone provide protocols?
Firs I want to get conditioned media and then precipitate after that I will do SDS-PAGE and CBB/silver staining. I am a newbie so I don't know how much medium, how much cells is needed for this assay, I couldn't find a good reference
how can I obtain free precipitation, temperature, and potential evaporation data for a specific lake for the past 20 years?
I have experience in studying the impact of hydrogeology on catastrophic floods. An example would be the flooding in Europe in the summer of 2002. See my discussion "How is geodynamics and hydrogeology taken into account?". see my publication "Floods and droughts as a result of deformability of the geological environment" for details.
The water content of the rivers is formed by atmospheric precipitation and underground waters. Influence of underground waters on water content of the rivers cannot be measured. It is shown that the volume of underground water exchange is underestimated and can be commensurable with a volume of atmospheric precipitation. Change of level of underground waters is defined by changes of volume of the geological environment during geodeformations. It is offered to consider geodeformations as one of the reasons of floods and droughts. Studied the changes the gravitational field and geodeformations during droughts and floods in the Amazon in 2005-2006. Studied the hydrological regime of the River Nile. Shows the influence of geodeformation on the level of Danube and Dniester. Proposed detailed study the causes of floods in Europe in 2002. Influence of the Earth’s surface deformation on floods and droughts is very important and requires special detailed study. Changes in volume of rocks during Earth's surface deformation are accompanied by dilatancy which influence on the amount of drought and flooding has turned out to be significant. Study of the processes considered in the thesis gives grounds to expect that floods and droughts associated with deformations of the geological environment will be successfully predicted. Foto https://www.google.com/url?sa=i&url=https%3A%2F%2Fren.tv%2Fnews%2Fv-mire%2F1138805-v-chernomorskom-regione-turtsii-livni-vyzvali-navodneniia&psig=AOvVaw2SdhsJ2lm16vYlBvplRoZX&ust=1694020292799000&source=images&cd=vfe&opi=89978449&ved=2ahUKEwjyktC_-5OBAxWdEBAIHSPSCyEQr4kDegQIARBc
The Impact of Climate Change on Water Resources..... how do you measure precipitation threshold to be classified as a storm event in louisiana?
I am trying to extract gDNA from culturable endophytes isolated from Gum trees but have not been getting good result from the protocol attached. The endophytes are pigmented.
I used mycelia of endophytes cultured in broth. After centrifuge of precipitation step, the DNA pellete was contaminated with dark colour (dark pellete). So I did not proceed further.
I than repeat the extraction but this time I ground mycelia in liquid nitrogen and use the same extraction protocol. I obtained white precipitated DNA pellet unlike the previous one. Then I dissolved DNA pellete in milliQ water. The NanoDrop readings were well below A260/230 and DNA yield was very poor.
If anyone/experts of endophytes can help me with DNA extraction advice.
I am using fresh mycelia of endophytes cultured in both broth and on solid agar. Both still hasn't yield good result.
DNA extraction protocol attached.
Which type of cloud is most likely to produce precipitation and process in which any product of condensation of atmospheric water vapour falls under gravity?
Antimicrobial material which is insoluble in water. When I dissolve in DMSO and diluted it with water(%10), it precipitated in the bottom of the tube. how can I use material for antimicrobial test?
I have a sample in the dissolved state. Acetone acts as an anti-solvent to precipitate the substance from the DMSO solution. However, the recovery yield is low. Is there any method to collect the samples in maximum yield?
Filtration can't be used as it will decrease the yield. I'm using centrifugation, to collect the samples now. Does anybody have any suggestions?
I am producing a flocculent precipitate when doing free radical polymerization of itaconic acid in aqueous solution, what should this substance be? How is it produced?The initiator is sodium persulfate at five percent of the total reactants, and the reaction temperature is 80 ℃.
With the help of standardized Precipitation Evapotranspiration Index how we get return period of drought?
We synthesized a peptide made up of 7 amino acids. After cleaving the peptide with TFA, we tried to precipitate the peptide from cold ether. However, it seems like our peptide is somehow soluble in ether. Are there any other organic solvents to precipitate peptides?
How can I train an ANN using current raster data (population, precipitation, DEM, land use) and use this model to predict future land use based on upcoming raster data (population, precipitation, temperature)?
I've been studying the relevant theory extensively recently, and I'd like to find a case study to see how it's practically implemented. Could you please guide me to where I can find similar case studies? I've noticed that many papers follow this approach, but I'm struggling to locate any code examples.
If there are no case studies available, I'd like to understand how to use raster data as inputs for an ANN and what preprocessing steps are needed, especially when dealing with multiple raster data inputs.
Hallo,
I have produced citric acid crosslinked samples of magnesium and sodium lignosulphonates and tried to precipitate my samples as they were water soluble during washing .I tried to preciptate with 0,1M , 1M and 2M HCl but none of it caused precipitation of my sample.The pH of the crosslinked sample was between 3-4.
Could anybody please suggest any other methods to precipitate the sample or a possible reason for no precipiation.
Thank you very much
Hello, could someone assist me in interpreting the results of the sequential Mann-Kendall Sneyer test? Indeed, according to Dufek (2008: Precipitation variability in São Paulo State, Brazil), "In the absence of any trend, the graphical representation of the direct series (u(t)) and the backward series (u'(t)) obtained with this method yields curves that overlap several times." In my case, I observe two to three overlaps, often with sequences that exhibit significant trends. Should I also conclude that there is an absence of trends in my dataset?
I performed DLS on purified exosomes with an EXO SPIN kit (precipitation and size exclusion chromatography) the Z-average was too big and the result wasn’t good I should mention that to break up aggregations I do sonication before analysis. Does anyone have any idea? Could filtering through 0.2 µm be a solver?
Hi
I work on complex fe(iii)-tannic acid , but I find precipitate of blue-black color, although ph=2
Can any one help me?
Tell me, on which rim of the centrifuge (G) can the suspension of plant cells be precipitated without damaging the cells?
I have been purifying a His-tagged protein first using Ni-NTA chromatography and then Gel Filtration. After purifying using Ni-NTA, the protein seems to be precipitated after keeping the protein overnight on ice (or even for few hours). The protein was eluted using a gradient of buffer using 500 mM Imidazole (in a buffer of 20 mM Sodium phosphate, 500 mM NaCl, 10% Glycerol, 1 mM DTT). I tried to remove the precipitation by centrifuging but it seems majority of it seems to be completely precipitated (very less in soluble fraction).
Any ideas? Thank you
In the past I have conjugated an acid to polyethyleneimine with percentage conjugation of around 25%. I wanted to increase this percentage, and so I doubled the amount of acid, EDC and NHS before this solution was added to the polyethyleneimine. After allowing to react in methanol, with no solubility issues, after I precipitated the polymer as normal in diethyl ether, I have found it is now insoluble in water or methanol. However, there was no suggestion of the polymer "crashing out" of solution in methanol while the reaction was stirring. Why is the polymer precipitate suddenly insoluble when this has never been an issue previously? The acid I am using is a simple phenylboronic acid.
I test BOD of inlet sample of sewage water, in which there is no problem in inital DO but when i incubate it for 5 days, after incubation when i go for estimation of final DO, on addition of MnSo4 &Azide respectively the colour of bottle turns white insted of yellow & finally on addtion of H2So4 it totally yruns transparent. Whereas the other two samples of blank and outlet does not show such change.
I am working on #RNA SELEX. During the process of converting RNA to cDNA, I found precipitation in the RT product. Can anyone suggest to me how to get rid of this precipitation? i am guessing I am not converting all RNA to cDNA; this precipitation might be the secondary structure formation. How to minimize this precipitate formation?
Thanks
I have precipitated out the protein using acetone from the alkaline-base buffer (NaOH + SDS+ EDTA + Beta Mercaptoethanol).
Desiccated Precipitates weigh more than the sample i.e for 2 grams of hair sample used, I am getting 2.6 grams of precipitates
Can one guide me on how can i separate my protein from the Desiccated Precipitates? Due to a limited budget, I can't use fancy techniques.
I am doing Trend analysis. When I was doing Homogeneity tests ( Pettitt, SNHT test, Buishand, von Neumann) on Precipitation and Temperature time series using XLSTAT, I found that a great number of my Temperature data are inhomogeneous. Can anybody tell me How can I make them homogeneous data?
I'm trying to reconstruct the time series of a weather station over the whole 1991-2020 period by using an external model as predictor.
I've successfully used ERA5-Land as predictor for temperature as the correlation with station data is quite high, however I'm struggling to do the same for precipitation.
What is the best alternative to reanalysis in this case? I was thinking about datasets of daily precipitation measured from satellite but the data seems to be quite coarse.
In my case I have the following requirements
- Temporal coverage from 1991-01-01 onwards (at least until 2020-12-31, but extension to present is quite important)
- Daily accumulated precipitation
- Grid spacing lower than 0.25 degrees
- Coverage of the Mediterranean area
You have any suggestions on which dataset I could use?
We have been trying to detect cytokines from equine synovial fluid using milliplex equine cytokine/chemokine magnetic bead panel. However it is rather hard and the values are always below detection. Is there anyway we can improve our sample? Can TCA acetone precipitation help concentrating the proteins and would the proteins still be detectable if we use this method?
Hello, I tried to prepare 10g/L MnCl2 solution but it got precipitated. What can be the possible reasons?
Hello all,
We cultured MSCs on calcium phosphate discs for 3 days and 7 days. We are seeing strange crystal-like precipitates or something of the sort (images attached). They are found wherever cells are found, or nearby cells, that are growing on the surface of the discs. We did EDS on these samples out of curiosity and the crystals appear to have a high concentration of NaCl, which indicates that they are salts.
I can't find any literature that shows this happening in their cell studies. Has anyone else seen this sort of thing happen in their cell cultures? I have no idea what could explain these results and I would appreciate some insights, or hypotheses, if any.
Thanks!
I purified one protein using 3 different columns. The last column I used is Butyl 650M hydrophobic interaction column and I eluted my target protein with 50% propylene glycol. I need to remove propylene glycol and concentrate my elution. I tried to remove it with acetone precipitation, and methanol chloroform precipitation. However, both of them resulted in a significant loss of my protein.
I wonder If I can use dialysis or not...due to its water-absorbing characteristic...
I do not want to add additional steps like gel filtration chromatography...
Does anyone have any technical suggestions and ideas?
Hi Everyone
I need to improve the solubility of Potassium Humates in hard water. Generally, potassium humates are soluble in hard water but within a few minutes, it has precipitated due to the complexation of humates with Ca & Mg ions. Can anyone help me to avoid this precipitation or sedimentation?
Hello, I am an undergrad trying to follow the methodology of the paper attached. I'm working with 50 mM phosphate buffer and 250 mM MgCl2 for hexokinase phosphorylation of CNF. I don't entirely understand why that concentration of buffer was used, and I keep getting Mg(OH)2 precipitates upon trying to get to pH 7.6. What could I be doing wrong?
Climate Data Operators (CDO)
Please somebody can share a script for ( to run on CDS toolbox editor https://cds.climate.copernicus.eu/toolbox-editor ) daily total precipitation data extraction on a point location for custom period (several years) ?
My polyurethane like polymer, when precipitated in ether gives a lower Mn while the same when precipitated in methanol gives a higher Mn. I have looked a lot in the literature to find some good explanation to it but seems to get nothing. Can someone please explain me.
involving stations which have been set up recently in SPI mapping
I have downloaded two types of half-hourly and three-hourly satellite precipitation data for the study area from Gportal. Now I have a question about those data, please help in this regard.
GPM_3IMERGHH half-hourly NetCDF file
3B-HHR.MS.MRG.3IMERG.20170322-S000000-E002959.0000.V06B.HDF5.SUB.nc4
Question 1: Does this file cover the amount of precipitation from 23:45 UTC of the previous day to 00:15 UTC of the current day or it represents the period from 23:30 UTC of the previous day to 00:00 UTC of the current day?
GPM_3IMERGHH half-hourly NetCDF file
3B-HHR.MS.MRG.3IMERG.20170321-S103000-E105959.0630.V06B.HDF5.SUB
Question 2: Does this file cover the amount of precipitation from 10:00 UTC of the current day to 10:30 UTC of the current day or it represents the period from 10:15 UTC of the current day to 10:45 UTC of the current day?
TRMM_3B42RT three-hourly NetCDF file
3B42.20170302.00.7.HDF.nc4
Question 3: Does this file cover the amount of precipitation from 22:30 UTC of the previous day to 01:30 UTC of the current day or it represents the period from 21:00 UTC of the previous day to 00:00 UTC of the current day?
GSMAP 1-hourly HDF file
GPMMRG_MAP_1703021800_H_L3S_MCH_04C.h5
Question 4: Does this file cover the amount of precipitation from 17:00 UTC of the current day to 18:00 UTC of the current day or it represents the period from 17:30 UTC of the current day to 18:30 UTC of the current day?
Kindest regards
Mahdavi
I used linalool standard for estimating total terpenoid content for my plant sample, different linalool concentration has been taken and finally the supernatant has been discarded, the red precipitate ring is treated with solvent. while discarding the supernatant either micro ml of precipitate been drawn or left with micro ml of supernatant, due to this i am unable to draw a standard curve and the values are non-linear . kindly help me out to find a better way for doing this experiment
- Numerous studies have suggested that carbonation and serpentinization of silicate minerals are controlled by an interface-coupled dissolution-precipitation mechanism (e.g., Putnis, 2002, 2009, 2014; Plümper et al., 2012; Altree-Williams et al., 2015).
- Moreover, this mechanism can lead to the pseudomorphic (isovolumetric) replacement of the parent phase by the product phase, assuming that the dissolution of the parent phase and the precipitation of the product are coupled in both space and time (Brugger et al., 2010; Putnis, 2009; Qian et al., 2010; Altree-Williams et al., 2015).
- However, I'm curious about the question that "could the interface-coupled dissolution-precipitation mechanism necessarily also not lead to pseudomorphic texture generation?".
So far I have found partial data, not a global coverage.
Data by station or simply a raster image would be great, as I need to calculate the average wind speed and precipitation by subnational region (for which I have a shapefile with the administrative boundaries).
Hi ResearchGate community,
I am interested in using chemical flocculation to concentrate water samples for eDNA analysis. This is basically to avoid having to filter water.
I have come across interesting papers on this subject, however, people use chemical flocculation for the precipitation of entire cells (bacterial communities). I am wondering if this method can also work when we are dealing with environmental samples (cells + mitochondria + free floating extracellular DNA + mucous + fecal matter, etc). I would appreciate if anyone with experience with this could comment. I am interested in knowing what is the % recovery of this method.
Thanks
Hello eveyone,
I'm trying to conjugate azide-MMAE compound to a protein. The azide-containg group is soluble in DMSO. The problem is when i combine all the ingridients for the reaction i get precipitation and only the protein remains (checked in MS analysis). My theory is that the amount of DMSO is so little in the total amount of the reaction that the organic compound is not soluble anymore. How do i prevent the precipitation of azide-MMAE, while also not denaturing the protein?
My reaction is as follows (for 1 ml, 37C, 550 rpm, 2hr):
50 ul of 50mM THPTA
25 ul of 20mM CuSO4
160 ul of 31.195uM protein
20 ul of 5mM azide-MMAE (stock is 50mM and diluted with PBS)
50 ul of 100mM ascorbic acid
and PBS to 1 ml
I would appreciate any assistance on this matter.
I have tried to modify gelatin with methacrylic anhydride (MA). However, when MA was added into gelatin PBS solution, it will form milky emulsion and a kind of precipitation. after dialysis, the precipitation can be reduced in some extent, but still exists.
can I ask whether this is a normal procedure or what should I do to avoid the precipitation?
Hi, I have monthly precipitation and monthly temperature (not classified as minimum and maximum). How can I calculate SPEI index using Rstudio? I have also additional inputs like year, months and latitude of the location where I am conducting research.
Thank you!
Hello all,
I recently started to use peptides for cellular studies. Unfortunately, when I was designing the peptides I did not have a FITC tag to them (the peptide was synthesized by an external company). The peptides still have an -NH2 terminal that I can react with FITC-NHS pretty easily. But due to the small size I would not be able to isolate the peptide from unreacted/hydrolyzed FITC-NHS by MW cutoff as I would for proteins.
The peptides are not very cheap so I would seek alternatives than purchasing more tagged peptides. While I know I could purify it by HPLC followed by concentration / lyophilization, it's adding a lot of procedures to the pipeline and I'm considering if there could be alternatives. And so, I'm wondering if peptides could be precipitated by TCA/acetone precipitation similar to proteins?
While I believe the precipitation is dependent on the peptide structure, I used one of our peptides and tried it out - the precipitation worked (I saw visual white fluffs) and the peptide absorbance curve showed peaks at 214/280. The curve looked identical to the peptide solution (unprecipitated) but with a lower absorbance unit (22 AU compared to 5 AU post-precipitation).
My question is, is this way of isolating peptides legit? And if I used FITC-NHS, would FITC also be precipitated by any chance? Will the peptide lose stability / increase cytotoxicity during TCA exposure? I am not using the peptide for functional studies, just trying to visualize cellular internalization.
- If this way makes no sense I will refer to other methods. Thanks for any suggestions.
I would like to prepare a calcium carboxylate. The procedure is overbasing the carboxylic acid with excessive Ca(OH)2 than bubbling CO2 through it to precipitate CaCO3. Can I just throw some pieces of dry ice into the mixture? Gas cylinder is hard to handle.